FC878073

Overview
NameFC878073
Unique NameFC878073
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878073 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 51/132 (38.64%), Postives = 71/132 (53.79%), Query Frame = 3 
Query:  504 AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFST--TDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPFIYVKLYTY 893
            ++  H+    +       K+ +SY    V+G+GSFGVV QAK   T   +A+K+VLQDKRYKNRELQIM+ + HPNI+ L   FF T    K              TV    R Y+R  + +P + +KLY +
Sbjct:    2 SDDSHLETKVVTDGTTGEKKTISYEPCRVLGSGSFGVVIQAKLVGTPGFIAVKRVLQDKRYKNRELQIMRAISHPNIIKL-IAFFHTHNPSKDETHLCLLLEYMPETVFDDMRWYTRRRKSIPNLSIKLYAF 132
The following BLAST results are available for this feature:
BLAST of FC878073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSK31_SCHPO1.696e-1538.64Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA8CB12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA8CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878073 ID=FC878073; Name=FC878073; organism=Citrus clementina; type=EST; length=893bp
CTTTCTCTCTCTCTTCAATCAACGAAACAGAACTAAAAAAGAACAAAATC
AAAATTAAAAAAATAAAACAGCAAAAATTAAAAGCAAAAAATCAGATCAG
CAAACAGTTTTCTACTTCTACCTGTTTTGTTTTAATTGCTTCGATTTTCA
TCTCATAAGCGTTCAAATTTTGTGAAGCTGAAAGCTGCAGAATGCGTGGA
ATTTGCTTCCACTTCTCGTTGAAGCGCTTCCAGATAGGTGTTTGGGTGGT
ACAGAAGGCACGACCTCAGAGCATCTGGAGGGTAGCGAATACTAGTATCT
GGAATACTCTCGAGTTTGTATAAATGGCATCTGCCAGCCTAGGGAATGGG
GGAGTGGGCAGTTCCAGGTCTGTTAACGGCTTCAAGAGTTCATCAAGTTC
GGTTGACTGGTTGGGGAGAGAAATGCTTGAAATGAGATTGCGGGACCAGG
TGGACAATGATGAAGACAGAGATAGTGAACCAGATATCATTGATGGTGTG
GGTGCTGAAACTGGACACGTCATACGAACAACGATTGGTGGTCGAAATGG
CAATTCTAAACAGAAAGTTAGTTATATAGCTGAGCATGTGGTTGGAACTG
GTTCTTTTGGTGTTGTCTTTCAAGCAAAATGTAGAGAAACTGGAGAGATT
GTTGCTATCAAGAAGGTTCTCCAAGACAAGCGCTATAAGAATAGGGAGTT
ACAGATTATGCAGATGTTGGACCATCCAAATATTGTTGCCCTTAAGCATT
GTTTCTTTTCAACAACAGACAAGGAAGAGCTTTACTTGAATCTTGTGCTT
GAATATGTTCCTGAAACCGTTAATCGAATTGCAAGGAACTACAGCAGAAT
CCACCAGCGGATGCCCTTTATATATGTTAAACTCTATACCTAT
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