FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PELCD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 76/268 (28.36%), Postives = 126/268 (47.01%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 T+ + + +I+ R + + F+T + ++ ++ FI +EE LK A + R G S L G+ +A+KD TT ++ L V P +G A V +L+ A+++GK NM E G+S N +G +NP++ + LG D GGS+R PA+ CGVVG KPT+GR+ GV+ ++ VG L VED ++ A+ G P+ +++ P + I +K+G +F Sbjct: 7 TIHELQALLKNREISSRELTQAFLTRIADTDQ---RIGAFITQSEEAALKNAEAADARLAAGNAAS-LTGIPLALKDIFITEGMRTTCASRILDNFVPPYSGTA--VRKLQEQDAVILGKLNMDEFAMGSSNENSAFGTVKNPWNQDCVPGGSSGGSAACVAARQAVATLGTDTGGSIRQPASHCGVVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVEDCALMLGAVAGYDPADSTSINTPVPDYQAALK-QGIQGLKIGLPKEYF 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METTH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanobacterium thermoautotrophicum GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 72/243 (29.63%), Postives = 117/243 (48.15%), Query Frame = 2 Query: 104 ERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTG--DACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 E+F+ + ++ ++ F+ E+ +K+A E R G+ L G++I VK I+ + + +K L TG DA + R++ I++G TNM E AG+S +G NP P +I +C +ALG D GGS+R PA+ CGV+GFKPT+G + G+L L + +G LAA V + I+G P+ T+ S P L+ + +++G Sbjct: 25 EKFLKRIEAKNDD---INAFLEVRGEEAIKRAEEIDARIASGKETGKLAGLVIGVKSNINVEDFNVSAASKTLENY---TGSYDATVIRRIKEEDGIIIGMTNMDEFAAGSSTETSFFGPTDNPAAPGRIPGGSSGGSAAAVAAGMCDLALGSDTGGSIRNPASHCGVMGFKPTYGAVSRQGLLDLAMSFDQIGPLAADVSGISLALDVISGYDPADPTTLD----SSPDLEVERELKGLRVG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOBM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 66/221 (29.86%), Postives = 110/221 (49.77%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S+ ++ + F+ + N K+ ++ +EE+ +K+A E + +K E + L G+ + +KD I+ T +K L DA +++ I++GK NM E G+S N + +A+NP+D ++ ++LG D GGSVR PA+ CG+VG KPT+GRI SGV+ T+ VG + VED ++ +AI G Sbjct: 16 SNKEVKAEEITRAFLDRINLVDN---KLGAYLYVSEEEAIKKAKEIDGKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILQGYTS-PYDAHVTEKIKKEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVSGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOB6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 66/221 (29.86%), Postives = 110/221 (49.77%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S+ ++ + F+ + N K+ ++ +EE+ +K+A E + +K E + L G+ + +KD I+ T +K L DA +++ I++GK NM E G+S N + +A+NP+D ++ ++LG D GGSVR PA+ CG+VG KPT+GRI SGV+ T+ VG + VED ++ +AI G Sbjct: 16 SNKEVKAEEITRAFLDRINLVDN---KLGAYLYVSEEEAIKKAKEIDGKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILQGYTS-PYDAHVTEKIKKEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSAIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANAMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaplasma marginale (strain St. Maries) GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 75/234 (32.05%), Postives = 114/234 (48.72%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++L+ + + D + R + E +I AV + + ++ F+ E L A + ++GEPI + G+ + VKD TT + L P T ++ +L GA+++GK NM E G+S +G +NP+ ++ LC ALG D GGSVR PAALCGVVG KPT+GR G++ ++ G+LA TVEDA V+ AI G Sbjct: 9 SILEAHRCLKNKDFSARELTEAYIGAVEQDT-----LNAFVTTTPELALAAADRTDGLLQRGEPIHPMSGIPVGVKDLFCTKGVRTTACSNILKNFVP-TYESTVSQKLWDSGAVMLGKLNMDEFAMGSSNTYSCFGPVKNPWKGTEGKDLTPGGSSGGSSAAVAGLLCAGALGSDTGGSVRQPAALCGVVGAKPTYGRCSRWGMIAYASSLDQAGVLARTVEDAAVMLNAICG 236
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANAMF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaplasma marginale (strain Florida) GN=gatA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23 Identity = 75/234 (32.05%), Postives = 114/234 (48.72%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++L+ + + D + R + E +I AV + + ++ F+ E L A + ++GEPI + G+ + VKD TT + L P T ++ +L GA+++GK NM E G+S +G +NP+ ++ LC ALG D GGSVR PAALCGVVG KPT+GR G++ ++ G+LA TVEDA V+ AI G Sbjct: 9 SILEAHRCLKNKDFSARELTEAYIGAVEQDT-----LNAFVTTTPELALAAADRTDGLLQRGEPIHPMSGIPVGVKDLFCTKGVRTTACSNILKNFVP-TYESTVSQKLWDSGAVMLGKLNMDEFAMGSSNTYSCFGPVKNPWKGTEGKDLTPGGSSGGSSAAVAGLLCAGALGSDTGGSVRQPAALCGVVGAKPTYGRCSRWGMIAYASSLDQAGVLARTVEDAAVMLNAICG 236
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RENSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 70/234 (29.91%), Postives = 117/234 (50.00%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 +SG++T V + ++ + +++ F++ N E+ L+ A E G+ + L GV IA+KD I PTT G+K L + P DA + ++R ++GKTN+ E G+S + +G RNP+D ++I P+ALG D GGS+R P A+ G VG KPT+G + G + + ++ +G ++ TV DA ++ I G P ++ P Sbjct: 17 ASGEVTSVQVTQAYLDRIALVDG---ELNAFLHLNAEEALRVAAEVDADRAAGKELHELAGVPIAIKDLIVTKGQPTTAGSKILEGWISPY--DATVIEKIRAAKMPILGKTNLDEFAMGSSTEHSAFGPTRNPWDLTRIPGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVTGTVGVKPTYGGVSRYGAIAMASSLDQIGPVSRTVLDAALLQEVIGGHDPKDSTSLVDP 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RALEH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 68/233 (29.18%), Postives = 114/233 (48.93%), Query Frame = 2 Query: 65 AYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVS 763 A ++ ++ +A ++ + +++ ++ FI+ + E L QA + R +GE + L GV IA KD + T G+K L DA V R+ G + +GKTNM E G+S N H+G RNP+D S++ L P A G D GGS+R P++ G+ G KPT+GR+ G++ ++ G +A + ED ++ A+ G P +++ Sbjct: 17 ALAARSVSAEELAREYLARIEQAA----ALNAFIHVDAERTLAQARAADERRARGEA-APLTGVPIAHKDVFVTRGWRATAGSKMLANYES-PFDATVVERMAAAGMVTLGKTNMDEFAMGSSNENSHFGPVRNPWDTSRVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPSSFSGITGIKPTYGRVSRYGMIAFASSLDQAGPMAHSAEDCALLLNAMAGFDPRDSTSIT 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEGPL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Lens) GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 68/231 (29.44%), Postives = 115/231 (49.78%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +++ SKA + + + + + I ++ + + ++ FI+ +E+ LK+A + L K GE L G+ +A+KD TT +K L + DA V + + GAI++GKTNM E G+S N ++G +NP+D ++ L P A+G D GGS+R PAA CG+ G KPT+G + G++ ++ G A + ED ++ I G Sbjct: 4 YSLAQLSKALHNREFSSVELTQHCINKIQSNKD----LNAFISLDEDQALKEAQSADLVLKNGEG-KPLTGIPMALKDLFCTKRLNTTCASKMLANFQ-APYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEGPC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Corby) GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 68/231 (29.44%), Postives = 115/231 (49.78%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +++ SKA + + + + + I ++ + + ++ FI+ +E+ LK+A + L K GE L G+ +A+KD TT +K L + DA V + + GAI++GKTNM E G+S N ++G +NP+D ++ L P A+G D GGS+R PAA CG+ G KPT+G + G++ ++ G A + ED ++ I G Sbjct: 4 YSLAQLSKALHNREFSSVELTQHCINKIQSNKD----LNAFISLDEDQALKEAQSADLVLKNGEG-KPLTGIPMALKDLFCTKRLNTTCASKMLANFQ-APYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAG 228 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |