FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEGPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila (strain Paris) GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 68/231 (29.44%), Postives = 115/231 (49.78%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +++ SKA + + + + + I ++ + + ++ FI+ +E+ LK+A + L K GE L G+ +A+KD TT +K L + DA V + + GAI++GKTNM E G+S N ++G +NP+D ++ L P A+G D GGS+R PAA CG+ G KPT+G + G++ ++ G A + ED ++ I G Sbjct: 4 YSLAQLSKALHNREFSSVELTQHCINKIQSNKD----LNAFISLDEDQALKEAQSADLVLKNGEG-KPLTGIPMALKDLFCTKRLNTTCASKMLANFQ-APYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_HALSA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halobacterium salinarium GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 68/179 (37.99%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 200 TESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGP 736 TE+T++ P LDG +AVKD I PTT G+K L P +A V L G +VGKTNM E G GT+ ++G +NP D +++ +ALG D GGSVR PAA CGVVG KPT+G + G++ ++ +G +A TVE A + I GP Sbjct: 8 TETTIQGAADGP---LDGTTVAVKDNISTKGVPTTCGSKMLADYEP-PYNATVVEDLLAAGGTIVGKTNMDEFGMGTTTETSYFGPTKNPVDETRVPGGSSGGSAAAVANGDADLALGSDTGGSVRAPAAYCGVVGLKPTYGLVSRYGLVAYANSLEQIGPIAPTVEGAAELLDVIAGP 182
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLFF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila felis (strain Fe/C-56) GN=gatA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23 Identity = 68/234 (29.06%), Postives = 113/234 (48.29%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +R + L+ + SG+ + +AE F + + ++ F++ +E ++A + ++GEP+ L GV I +KD I + TT +K L + P DA + R+ I++GK NM E G++ + +NP+D S + CP+ALG D GGS+R PAA CGVVGFKP++G + G++ ++ +G L VED + G Sbjct: 2 YRKSALELRNSVVSGESSATAIAEYFYNRIETEDS---RIGAFLSLCKERAYEKAAIVDAKRERGEPLGKLAGVPIGIKDNIHVTGLRTTCASKMLENYIAPF--DATVIKRIEAEDGIILGKLNMDEFAMGSTTQYSAFHPTKNPWDLSCVPGGSSGGSAAAVSARFCPMALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDVFAG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEPBP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 69/214 (32.24%), Postives = 110/214 (51.40%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNP-PMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVG 679 T + K + G ++ +E ++A E N K+ F+ N+E ILKQA ES R K G+ +S DG+ I +KD I + T+ +K L V P DA + +L+ G +L + NM E G+S N + ++NP+D +I + P++LG D GGS+R PA+LCG+ G KPT+GR+ G++ ++ +G Sbjct: 8 TYSEIKKRLNEGSLS----SEELVSAYLERINAVDSKLKAFLELNQEKILKQAKESDDRRKNGKLLSEFDGIPIGIKDNICITGEVTSCSSKILENFVSPY--DATVISKLKEKGFVLFPRLNMDEFAMGSSTENSAFQTSKNPFDSDRIPGGSSGGSAAAVAGSMLPISLGSDTGGSIRQPASLCGIWGLKPTYGRVSRYGLVAYASSLDQIG 215
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEPBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 69/214 (32.24%), Postives = 110/214 (51.40%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNP-PMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVG 679 T + K + G ++ +E ++A E N K+ F+ N+E ILKQA ES R K G+ +S DG+ I +KD I + T+ +K L V P DA + +L+ G +L + NM E G+S N + ++NP+D +I + P++LG D GGS+R PA+LCG+ G KPT+GR+ G++ ++ +G Sbjct: 8 TYSEIKKRLNEGSLS----SEELVSAYLERINAVDSKLKAFLELNQEKILKQAKESDDRRKNGKLLSEFDGIPIGIKDNICITGEVTSCSSKILENFVSPY--DATVISKLKEKGFVLFPRLNMDEFAMGSSTENSAFQTSKNPFDSDRIPGGSSGGSAAAVAGSMLPISLGSDTGGSIRQPASLCGIWGLKPTYGRVSRYGLVAYASSLDQIG 215
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEGPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 67/231 (29.00%), Postives = 116/231 (50.22%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +++ SKA + + + + + I ++ + + ++ FI+ +E+ LK+A + L K GE L G+ +A+KD TT +K L + DA V + + GAI++GKTNM E G+S N ++G +NP+D +++ L P A+G D GGS+R PAA CG+ G KPT+G + G++ ++ G A + ED ++ + G Sbjct: 4 YSLAQLSKALHNREFSSVELTQHCINKIQSNKD----LNAFISLDEDQALKEAQSADLVLKSGEG-KPLTGIPMALKDLFCTKRLNTTCASKMLANFQ-APYDATIVTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_HALHL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 69/233 (29.61%), Postives = 109/233 (46.78%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H+ TV + S A +G+I+ R + + + + E +P + + + A ++ LR + P++ GV + KD TT G++ L R DA V RL GA+++GK NM E G+S ++G RNP+D + L P A G D GGS+R PAAL G+ G KPT+GR+ G++ ++ G A T ED ++ + G Sbjct: 2 HQKTVAEISAALHAGEISSRELTDSLLKRI-EQFDPRLNSLITVTAEQARAAADAADARLRAGEAGPLT---GVPLVHKDIFCTDGVATTCGSRMLEPFR-APYDATVVRRLAEAGAVMLGKANMDEFAMGSSNETSYFGPVRNPWDLDAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALSGICGLKPTYGRVSRYGMVAFASSLDQAGPFARTAEDLALLLGGMAG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOBH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 66/221 (29.86%), Postives = 110/221 (49.77%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S+ ++ + + F+ + N K+ ++ +EE+ +K+A E + +K E + L G+ + +KD I+ T +K L DA +++ I++GK NM E G+S N + +A+NP+D ++ ++LG D GGSVR PA+ CGVVG KPT+GRI SGV+ T+ VG + VED ++ + I G Sbjct: 16 SNKEVKAEEITKAFLDRINLVDN---KLGAYLYVSEEEAIKKAKEIDGKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTS-PYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSVIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOB1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gatA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23 Identity = 66/221 (29.86%), Postives = 110/221 (49.77%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S+ ++ + + F+ + N K+ ++ +EE+ +K+A E + +K E + L G+ + +KD I+ T +K L DA +++ I++GK NM E G+S N + +A+NP+D ++ ++LG D GGSVR PA+ CGVVG KPT+GRI SGV+ T+ VG + VED ++ + I G Sbjct: 16 SNKEVKAEEITKAFLDRINLVDN---KLGAYLYVSEEEAIKKAKEIDGKIEKNEELKALSGIPVGIKDNINVKGMQNTCASKILEGYTS-PYDAHVTEKIKQEEGIILGKLNMDEFAMGSSTENSAFKLAKNPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSGVVAFGSTLDQVGPMGKDVEDCALLTSVIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN1_AGRVS (Indoleacetamide hydrolase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=iaaH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 62/180 (34.44%), Postives = 96/180 (53.33%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFP 784 L G+ + K I +PT+ GT+ L + +P A V RL GA++ NMHEL G + N +G ARNP++ + I+ L +G D G SVR+PAALCGVVGF+PTFG P G++P++ + G++ +VEDA+++ I P+Q ++ ++ P Sbjct: 66 LMGIPLCFKANIATGIFPTSAGTQGLLRHKPAI-PAKIVERLHSAGALIGASGNMHELSFGITNDNKTFGPARNPWNQALISGGSSGGVAVSVAANLMLGGIGTDTGASVRLPAALCGVVGFRPTFGNYPTDGIVPVSPSRDTPGLIVRSVEDAVLLDRIIRNKCPTQNMSLKGLRLGLP 244 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |