FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=gatA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 74/236 (31.36%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSL 766 SK SS D+T + V +R E+ P ++ ++ ++E+ ++ A ++ +GE + L G+ +A+KD + TT +K L P DA + +L+ GA+LVGKTNM E G+S N + +NP+D ++ +C A G D GGS+R P + C VVG KPT+GR+ G++ ++ +G A TVEDA ++ A+ G PS +V++ Sbjct: 17 SKEISSQDLT-KAVLDRI-----EAVEP--QVDAYLTVSKEEAMEAAQKADKALAQGET-APLCGIPLAIKDVMCTKGVLTTCASKILGNFVP-PYDATSITKLKEAGAVLVGKTNMDEFAMGSSTENSAFKTTKNPWDLTRTPGGSSGGSAAAVAADMCLGAFGSDTGGSIRQPGSHCSVVGLKPTYGRVSRYGLVAFASSLDQIGPFAKTVEDAAILLQAVAGYDPSDSTSVNV 242
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOK1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium kluyveri (strain NBRC 12016) GN=gatA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 75/252 (29.76%), Postives = 124/252 (49.21%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPT--VSLPKVSFPLLKSATSISAIKLG 826 +I+ +A ++ V E K+ ++ E +L++A E + +GE + L G+ I+VKD I T ++ L + P DA V +++ I++GKTNM E G+S N ++RNP+D +++ +++G D GGS+R PA+ CGVVG KPT+GRI G + T+ +G +AA VED ++ I+G T + +PK S L K I +++G Sbjct: 19 EISVEEIARTYLDRVDEVDG---KLGAYLYVASEGLLQKAKELDKKISRGEILGKLFGIPISVKDNISVENMQNTCASRMLTGYISPY--DAHVVEKIKFHQGIIIGKTNMDEFAMGSSTENSSIKLSRNPWDLNRVPGGSSGGSAISVAAGEAALSIGTDTGGSIRQPASFCGVVGLKPTYGRISRYGAVAFGSTLDQIGTIAADVEDCALLTECISGMDKRDFTTADMEVPKYSKSLSK---DIKGMRIG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_AKKM8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gatA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23 Identity = 70/195 (35.90%), Postives = 96/195 (49.23%), Query Frame = 2 Query: 203 ESTLRYKKGEPISV-LDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 E+ L G IS L G+ IAVKD I+ PT ++ L V P DA + L+ G I +G+TNM E G SG N YG+ RNP P +I ALG D GGS+R PA CG+VG KPT+GR+ G++ ++ +G + TVEDA ++ AI+G + + P F Sbjct: 48 EAALHAAAGADISSPLAGIPIAVKDNINVLGQPTRCASRLLSPYVAPY--DATSIRLLKEAGGIPLGRTNMDEFAMGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIAALGSDTGGSIRQPAGHCGIVGLKPTYGRVSRYGLVAFASSLDQIGPMTRTVEDAAILLQAISGHDRKDSTSANCPVPDF 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THELT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=gatA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 64/171 (37.43%), Postives = 86/171 (50.29%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVS 763 G+ IA+KD I TT G+K L P DA CV RL+ G +VGKTN+ E G+S + V RNP+D + ALG D GGSVR PAA CG+VGFKPT+G + G++ ++ +G + +V DA ++ I G P TVS Sbjct: 51 GIPIAIKDNITTKNIRTTCGSKMLENYTP-PYDATCVKRLKNYGFAIVGKTNLDEFAMGSSTERSAFFVTRNPWDLDYVAGGSSGGSAAAVASGEVVAALGSDTGGSVRQPAAFCGIVGFKPTYGLVSRYGLVAFASSLDQIGPMTKSVRDAALIMEVIAGKDPMDSTTVS 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EUBE2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 70/247 (28.34%), Postives = 114/247 (46.15%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 +T ++ + +G+ T E I + +S + +++ ++ ++E L A ++ K G+ L GV A+KD + TT +K L P T A V RL+ GA+++GKTNM E G++ +G +NP +P + C ALG D GGS+R PA+ CGVVG KPT+G + G++ ++ +G L V D + AI G ++ SF Sbjct: 6 YTAVELAAKIKAGETTATEAMEAVIAQIEKSED---ELNCYVTFDKEKALAAAKKADEDIKAGKLTGPLAGVPFAIKDNMCTEGMLTTCSSKILGNFVP-TYTADAVERLQNAGAVIIGKTNMDEFAMGSTTETSAFGATKNPRNPEHVPGGSSGGSAAAVAANECFAALGSDTGGSIRQPASYCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPLCKDVTDCATIMEAIAGKDDKDSTSIGRDDYSF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CORJK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium jeikeium (strain K411) GN=gatA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 78/269 (29.00%), Postives = 123/269 (45.72%), Query Frame = 2 Query: 32 FHRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGE-PISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVS---LPKVSFPLLKSATSISAIKLG 826 F WT + ++ + +I+ + V + + + E + F++ ++ L A+ G+ P S L GV +A+KD + PTT +K L DA MRLR G ++GKTNM E G+S N YG +NPYD + + P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G + + S P V ++ +S +KLG Sbjct: 16 FTTWTAAELAEKIHAREISSQEVTQAHLDRIGEIDGD---IHAFLHVGADEALAAASNVDDALAAGDQPTSKLAGVPLALKDVFTTTDAPTTCASKMLEGYMS-PYDATVTMRLRAAGIPILGKTNMDEFAMGSSTENSAYGATKNPYDLERTPGGSGGGSSAALAAGMAPLAIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAGHDANDSTSSSHAVAPVVEAAKQGASGDLSGVKLG 280
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA1_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 1 OS=Clostridium acetobutylicum GN=gatA1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23 Identity = 71/234 (30.34%), Postives = 110/234 (47.01%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 S ++ V F+ + E K++ + +E+ + A E + + GE +S L GV +A+KD I T +K L V P DA + L+ +++GK NM E G+S N + V++NP+ ++ P++LG + GGSVR PA+ CG+VG KPT+GRI GV+ T+ VG+ A VED ++ I G TV P Sbjct: 16 SKKEVKVEEVTNSFLNRIEEVDE---KVNALLYVAKEEAVNTAKELDKKIESGESLSGLSGVPVAIKDNISVKNMQNTCASKILEGYVSPY--DATVIENLKKNNGVIIGKANMDEFAMGSSTENSAFKVSKNPWSLERVPGGSSGGSAVAVASLEAPISLGTETGGSVRQPASFCGLVGLKPTYGRISRYGVVAFGSTLDQVGMFARDVEDCALLTQNIAGLDKMDFTTVDTP 244
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOFD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23 Identity = 78/268 (29.10%), Postives = 126/268 (47.01%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQA--TESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPT-VSLPKVSFPLLKSAT-SISAIKLG 826 H TV + + ++ A+ F+ + +++ + F++ NEE L+QA + L G L GV +A KD + +T G++ L R DA V +L G + +GK N E G++ N +G RNP+D ++ L P A G D GGS+R PA+ CGV G KPT+GR G++ ++ G +A T +D ++ +A+ GP P + T + LP F +S T SI +++G Sbjct: 8 HDLTVAQLASLLRARKVSALETAQHFLARAQANAS----LGAFLDFNEEVTLRQARAADLALAADSGGATPTLLGVPMAHKDIFVTRDFISTAGSRMLAGYRS-PFDATVVSKLAAQGVVTLGKLNCDEFAMGSANENSAFGPVRNPWDLTRTPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPASFCGVTGIKPTYGRASRYGMVAFASSLDQAGPMARTAQDCALLLSAMCGPDPDRDSTSLDLPAEDF--TRSLTESIEGLRIG 268
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METS3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23 Identity = 69/259 (26.64%), Postives = 123/259 (47.49%), Query Frame = 2 Query: 47 VLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKL 823 V++ + + ++T + E FI + E + +++ F+ N+E LKQA + GE + L G++ +K I+ Y + +K L + +A + ++ I++G TNM E AG+S +G +NP P +I +C +ALG D GGS+R PA+ CGVVGFKPT+G + G+L L+ ++ +G L+ + AI+ ++ T+ + F S+ +K+ Sbjct: 3 VIEKLNSIQNKEMTAKENVENFIKVIDEKNE---ELNIFLEVNKESALKQAEAIDEKIANGEKVGFLSGLVFGIKANINVEDYIISAASKTLDNYFG-SYNATVIDKILAQDGIILGITNMDEFAAGSSTETSCFGPTQNPAAPGRIPGGSSGGSAAAVAAEMCDIALGSDTGGSIRNPASHCGVVGFKPTYGAVSRQGLLDLSMSLDQIGPLSNDTSGIALALNAISDYDETECTTLHGKRPDFTSALEEKSLEGMKI 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23 Identity = 70/200 (35.00%), Postives = 98/200 (49.00%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 L GV +AVKD I TT +K L P DA V L+ GA +VGKTNM E G GT+ N YG NP D ++ L A+G D GGS+R PAA CG+VG KPT+GR+ G++ ++ +G +A V+ +Y+ I G +V P P+ + I+ +K+G D +F Sbjct: 29 LSGVTVAVKDNISTKGIETTCASKILKGYIP-PYDAHVVTLLKNAGAAIVGKTNMDEFGMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCGIVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVIAGHDSRDATSVDKPYKHNPV----SDITGLKIGVPDEFF 223 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |