FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CUPTR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23 Identity = 68/232 (29.31%), Postives = 112/232 (48.28%), Query Frame = 2 Query: 65 AYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 A ++ ++ +A ++ + +++ ++ FI+ + E L QA + R +GE + L GV +A KD + T G+K L DA V R+ G + +GKTNM E G+S N H+G RNP+D ++ L P A G D GGS+R PA+ G+ G KPT+GR+ G++ ++ G +A T ED ++ A+ G P ++ Sbjct: 17 ALAARTVSAEELAREYLARIEQAA----ALNAFIHVDAELTLAQARAADERRARGEA-APLTGVPVAHKDVFVTRGWRATAGSKMLGNYES-PFDATVVERMAAAGMVTLGKTNMDEFAMGSSNENSHFGPVRNPWDAGRVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAHTAEDCALLLNAMAGFDPKDSTSI 242
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlamydophila abortus GN=gatA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23 Identity = 68/231 (29.44%), Postives = 109/231 (47.19%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 + L+ A SG+ + +A+ F ++ N ++ F++ EE ++A + +GEP+ L GV I +KD I TT +K L + P DA V R+ +++GK NM E G++ + +NP+ S + CP+ALG D GGS+R PAA CGVVGFKP++G + G++ ++ +G L VED + G Sbjct: 5 SALELRNAVVSGESSATAIAKYFYNRIKTEDN---QIGAFLSLCEERAYEKAAIIDAKVARGEPLGKLAGVPIGIKDNIHIRGLRTTCASKMLENYIAPF--DATVVERIEAEDGVILGKLNMDEFAMGSTTQYSAFHPTKNPWGLSCVPGGSSGGSAAAVSARFCPIALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFGSSLDQIGPLTTVVEDVALAMDVFAG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ALCBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gatA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22 Identity = 70/238 (29.41%), Postives = 116/238 (48.74%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQA--TESTLRYKKGEPI--SVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H T+ + ++GD + R + E F+ +++ +++ F+ EE L QA ++TL + +L G+ IA KD T+ G+K L + P T A V ++ GA+++GKTNM E G+S +YG +NP+D ++ L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G +A + ED ++ A+ G Sbjct: 2 HTKTLTELKAGLAAGDFSSRELTEHFLARIKQYDG---ELNSFVTVTEEQALAQADAADATLATNRASSSVSGLLTGLPIAHKDIFCTEGVRTSCGSKMLDNFIAPYT--ATVVEKMAAEGAVMLGKTNMDEFAMGSSNETSYYGPVKNPWDLERVPGGSSGGAAACLGARLAPAATGTDTGGSIRQPAALNNITGLKPTYGRVSRWGMIAFASSLDQAGPMAQSAEDCALMLQAMAG 234
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylococcus capsulatus GN=gatA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22 Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ FI E L QA + R KGE L G+ IA KD T+ G++ L V P DAC V R GA+++GK NM E G+S +YG +NP++ + + L P A G D GGS+R PAA CG+ G KPT+GR+ G++ ++ G +A T ED ++ + G Sbjct: 38 LNSFITTTPEIALAQARAADERLAKGEA-GPLTGIPIAQKDIFCTKGVRTSCGSRMLDSFVSPY--DACVVERFNAAGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWNTATVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAAFCGITGLKPTYGRVSRWGMIAFASSLDQAGPMARTAEDCAIMLQIMAG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESOH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=gatA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22 Identity = 67/204 (32.84%), Postives = 106/204 (51.96%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 K+ +I E L A + R + G I+ L G+ +AVKD I + TT ++ L P DA + +L+ GA++ GK NM E G+S + G +NP++ + I +C +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G+LA V D+ ++ +AI+G PS +V Sbjct: 39 KVGAYITLARESALSAAAAADTRLQSGG-IAPLTGIPLAVKDLICTTGLRTTCASRMLETFMP-PYDATVIEKLKTQGAVITGKVNMDEFAMGSSTEHSALGSTKNPWNLACIPGGSSGGSAASVAADMCLGSLGSDTGGSIRQPASHCGVVGIKPTYGRVSRYGLVAFASSLDQIGVLAKDVTDSALLLSAISGHDPSDSTSV 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DEIDV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22 Identity = 77/245 (31.43%), Postives = 122/245 (49.80%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 ++T ++A ++G+ TP+ + ++ + +S ++ ++ NE+ QA E + R GE + L GV + VKD I+ S TT G++ L V P T A RL GA++VGK NM E G+S + G NP+D S++ L PV+LG D GGSVR PAAL GV G KPT+GR+ G++ ++ +G A + D ++ + G P ++ P Sbjct: 4 QFTATALARAVTAGETTPQALLDQAVARAEAAST----LNALVSLNEQ-AGAQAAEVSRRLAGGEALP-LAGVPVIVKDNINVSGTRTTCGSRILATYVSPYTATAA--QRLIDAGAVIVGKANMDEFAMGSSTESSASGPTLNPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALTGVYGLKPTYGRVSRYGLVAYASSLDQIGPFARSAADLALLMNVVAGHDPRDATSLEAP 240
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ARTAT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Arthrobacter aurescens (strain TC1) GN=gatA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22 Identity = 78/264 (29.55%), Postives = 126/264 (47.73%), Query Frame = 2 Query: 68 YSSGDITPRMVAERFITAVRES-------SNPPMKMSFFINNNEEDILKQATESTLRYKKG----EPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 +S+ D+ ++ A R +TAV + ++ +++ F++ N E+ L A E G E + L GV IAVKD I PTT G+K L DA V +LR ++GKTN+ E G+S + YG RNP+D +I P+ALG D GGS+R P A+ G VG KPT+G + G + + ++ +G ++ TV D+ ++ I G P +++ P +++ +K+G Sbjct: 11 HSAADLAAKL-ASREVTAVEVTQAHLDRIADVDGQVNAFLHVNSEEALAVAAEVDAARAAGGSAAEELHALAGVPIAVKDLIVTIGQPTTAGSKILEGWHS-PYDATVVKKLRAAKMPILGKTNLDEFAMGSSTEHSAYGPTRNPWDLDRIPGGSGGGSAAAVAAFEAPLALGTDTGGSIRQPGAVTGTVGVKPTYGAVSRYGAIAMASSLDQIGPVSRTVLDSALLQEVIGGHDPFDSTSLTDPFNDLVAAARVGNVAGMKIG 272
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RALSO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia solanacearum GN=gatA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ FI+ + E L QA + R G+ L G+ IA KD + T G+K L V P DA V RL G + +GKTNM E G+S N H+G +NP+D +++ L P A G D GGS+R PA+ G+ G KPT+GR+ G++ ++ G +A T ED ++ +A+ G Sbjct: 37 LNAFIHVDPEATLAQAQAADARLAAGDA-GPLAGIPIAHKDVFVTRGWRATAGSKMLDSYVSPF--DATVVERLAAAGMVTLGKTNMDEFAMGSSNENSHFGPVKNPWDVARVPGGSSGGSAAAVAADLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARTAEDCALLLSAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LEIXX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leifsonia xyli subsp. xyli GN=gatA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22 Identity = 68/191 (35.60%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F++ E L+ A E R GE + GV +A+KD + + P+T G+K L P DA V +LR + +GKTNM E G+S + YG RNP+D +I P+ALG D GGS+R PAA+ G VG KPT+G + G + L ++ VG ++ TV DA +++ I G Sbjct: 44 FLHVAGEKALRTAAEIDGRRASGEKLGPFAGVPVAIKDVLATNDMPSTSGSKILEGWLP-PYDATVVRKLREADLVPLGKTNMDEFAMGSSTEHSAYGPTRNPWDLERIPGGSGGGSAAAVSAFEAPLALGSDTGGSIRQPAAVTGSVGVKPTYGGVSRYGAIALASSLDQVGPVSRTVLDAGLLHDVIAG 233
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ROSCS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=gatA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22 Identity = 70/245 (28.57%), Postives = 111/245 (45.31%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 ++ TV + + G+I+ + + +T + K+ F+ + QA + R G+ +L G+ + +KD I TT +K L P DA V RL+ GA+++GK N E G+S N + RNP++ ++ P ALG D GGS+R PAALCG+ G KPT+GR+ G++ ++ +G +A TV D +V I G P P Sbjct: 5 YQLTVAQAREMLARGEISSLELTDALLTRIAAVEP---KVRAFLVVDAAGARAQARAADARRAAGDASPLL-GIPMGIKDVISTQGLRTTCASKMLENYTPVY-DATAVARLKAAGAVILGKLNCDEFAMGSSTENSAFQQTRNPWNLERVPGGSSGGSAAAVAAGEAPAALGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIVLRVIAGADPFDATCTDYP 244 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |