FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_FUSNN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Fusobacterium nucleatum subsp. nucleatum GN=gatA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22 Identity = 75/267 (28.09%), Postives = 124/267 (46.44%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 T + + S +++ + F + + + K+ F++ ++ L +A + + K GE + L G+ IA+KD I +T +K L DA V +L+ AI++G TNM E G++ + NP+D +++ P++LG D GGSVR PA+ CGVVGFKPT+GR+ G++ ++ +G LA TVED + I G + TVS +V I +K+G +F Sbjct: 10 TAKELRDKFLSNELSAEEIVNSFYERIEKVED---KIKSFVSLRKDKALDEARKLDEKRKNGEKLGRLAGIPIAIKDNILMEGQKSTSCSKILENYIGIY-DATVVKKLKEEDAIIIGITNMDEFAMGSTTKTSFHHKTSNPWDLNRVPGGSSGGAAASVAAQEVPISLGSDTGGSVRQPASFCGVVGFKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAG-VDDYDATVSKKEVPDYTEFLNKDIKGLKIGLPKEYF 271
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHRSD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gatA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22 Identity = 78/273 (28.57%), Postives = 127/273 (46.52%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVS--LPKVSFPLLKSATSISAIKLGKYDAWF 844 H T+ + + +G+ + R + + + ++ ++ FI+ E L A + G+ + L G+ +A+KD T+ G+K L V P DA V ++R G + +GKTNM E G+S N YG +NP+D S + L P ALG D GGS+R PAA CG+ G KPT+GR+ G++ ++ G +A T D ++ I G +V+ +P S L TS++ +K+G +F Sbjct: 2 HDKTLTELAAGLRAGEFSSRELCQSALDRIQRLDGD---LNSFISVTAEQALADADAADQARASGDA-AALAGLPLALKDIFCTQGVRTSCGSKMLDSFVAPY--DATVVEKIRQAGGVSLGKTNMDEFAMGSSNENSFYGPVKNPWDLSAVPGGSSGGSAAAVAAGLVPAALGTDTGGSIRQPAAFCGITGLKPTYGRVSRYGMVAYASSLDQGGPMARTAADCALLLETIAGHDVRDSTSVARVVPDYSAEL---DTSLAGLKIGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RALEJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia eutropha (strain JMP134) GN=gatA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22 Identity = 65/223 (29.15%), Postives = 108/223 (48.43%), Query Frame = 2 Query: 65 AYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 A ++ ++ +A ++ + ++ ++ F + + E L QA E+ R +GE ++L GV +A KD + T G+K L DA V R+ G + +GKTNM E G+S N +G RNP+D ++ L P A G D GGS+R P++ G+ G KPT+GR+ G++ ++ G +A T ED ++ A+ G Sbjct: 17 ALAARSVSAEELARTYLARIEQAG----ALNAFTHVDAERTLAQAREADARRARGEA-TLLTGVPVAHKDVFVTRGWRATAGSKMLANYES-PFDATVVERMAAAGMVTLGKTNMDEFAMGSSNENSFFGAVRNPWDTDRVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPSSFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAHTAEDCALLLNAMAG 233
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROM2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9215) GN=gatA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22 Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 +++ +I +++ ++QA + E + L G+ IA+KD I TT +K L P ++ +L G I +GKTN+ E G+S +GV NP+D +++ C A+G D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + TV DA + +I+G P + P ++ L SI+ +K+G Sbjct: 34 EINSYICTTKDNAIEQAENIDKLIQNKEKLPPLAGIPIAIKDNICTKGVATTCASKMLKSFVP-PYESTASSKLWSSGGICLGKTNLDEFAMGSSTETSLFGVTSNPWDINRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPFDSTCLDKPVPNY-LNDLNKSINGLKIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9605) GN=gatA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 73/263 (27.76%), Postives = 125/263 (47.53%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SLPKVSFPLLKSATSISAIKLG 826 T+ + + SG+++ R + ++ + + ESS P ++ F+ + +A+ GE + L G+ +A+KD + TT ++ L + P ++ RL G +LVGKTN+ E G S +G +NP++ + + C +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG A +V D + I GP P + ++P S L + SI +K+G Sbjct: 7 TISAWRQQLQSGEVSSRELVDQHLKRL-ESSEP--SLNAFVEVTADQARAEASRIDEARAAGEALGPLAGLPLAIKDNLCTKGVRTTCSSRMLEQFVP-PYESTVTERLWQAGGVLVGKTNLDEFAMGGSTETSAFGATQNPWNTAHVPGGSSGGSAAAVAAGSCVASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGSVADVAELLQVIAGPDPRDSTCLDAAVPVFSDGL---SQSIKGLKVG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gatA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 70/218 (32.11%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +ITP V A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I TT +K L P ++ + +LR A+L+GK NM E G S +Y NP+D + + L P +LG D GGS+R PAA CG+VG KPT+GR+ G++ ++ +G L TV+D +V AI G Sbjct: 19 EITPSKVVSDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMEGKLFGIPMGIKDNIITEGVETTCASKMLEGFVPIY-ESTVMNKLRNEQAVLIGKLNMDEFAMGGSTETSYYKKTVNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGIVGLKPTYGRVSRFGLVAFASSLDQIGPLTRTVKDNALVLEAITG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SACD2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gatA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 70/219 (31.96%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVV 715 +K++SS +IT + F+ ++ + + FI EE L QAT + R G+ L GV +A KD + T+ G+K L P DA V G +++GKTNM E G+S +YG +NP+D + + L P A D GGS+R PAALCG+ G KPT+GR+ G++ ++ G + T EDA ++ Sbjct: 15 NKSFSSVEIT-----QHFLNRIKTLDT---EYNSFITLTEEQALAQATAADARLAAGDA-PALCGVPLAHKDIFCTNGVRTSCGSKMLDNFVP-PYDATVVTNYSQDGVVILGKTNMDEFAMGSSNETSYYGPVKNPWDTNCVPGGSSGGSAAAVAARLVPGATATDTGGSIRQPAALCGITGIKPTYGRVSRWGMIAFASSLDQAGTMTRTAEDAALM 223
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MOOTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 70/228 (30.70%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA--TSISAIKLG 826 ++ ++ E L++A +GE + L GV +A+KD + TT ++ L P DA V RL+ GA+++GK NM E G+S N + RNP+D ++ ALG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + V D +V AI G P + LP P +SA + +K+G Sbjct: 39 RVQAYLTRTAEQALEEARAVDAARARGETLGPLAGVPMALKDNLCTEGVRTTCSSRMLADWVP-PYDATVVRRLKEAGAVMLGKLNMDEFAMGSSTENSSFFPTRNPWDLERVPGGSSGGAVAAVAAGEAYFALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPITRDVTDCALVLEAIAGHDPLDSTSADLP---VPDYRSALKPEVKGLKIG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_JANMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Janthinobacterium sp. (strain Marseille) GN=gatA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 73/250 (29.20%), Postives = 118/250 (47.20%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 H T+ + S S I+ +A+ F+ + +S ++ F++ + LK+A + R G+ +VL G+ IA KD + +T G+K L V P DA V + + G + +GK N E G+S N ++G +NP+D + I L P + D GGS+R PAALCGV G KPT+G + G++ ++ G +A T ED ++ A+ G P ++ K F Sbjct: 2 HTKTLKELSALLHSKQISATELAQLFLDRIAQSD-----LNAFLHVDPALTLKEAALADQRLASGDT-TVLTGIPIAHKDIFVTRDWRSTAGSKMLENYVSPF--DATVVEQFKQAGMVHLGKLNCDEFAMGSSNENSYFGAVKNPWDKAAIPGGSSGGSAAAIAARLTPASTATDTGGSIRQPAALCGVTGIKPTYGSVSRFGMIAFASSLDQGGPIAKTAEDCGLLLNAMTGFDPRDSTSIERDKEDF 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_COREF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium efficiens GN=gatA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 73/231 (31.60%), Postives = 107/231 (46.32%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGE-PISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 T + + S ++T R V + + + E ++ F++ EE L A GE P S L GV +A+KD + + PTT +K L DA +LR G ++GKTNM E G+S N YG RNP+D + P+A+G D GGS+R PAAL VG KPT+G + G++ ++ VG A TV D +++ I G Sbjct: 18 TAAELAGLIHSREVTSREVTQAHLDRINEVDG---EIHAFLHVGEEAALAAADAVDKALDAGEAPASALAGVPLALKDALVTTDAPTTAASKILEGYMS-PYDATVTRKLREAGIPILGKTNMDEFAMGSSTENSAYGATRNPWDLERTPGGSGGGSSAALASGEAPLAIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQVGPTARTVLDTALLHEVIAG 244 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |