FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROM9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9312) GN=gatA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.993e-22 Identity = 71/234 (30.34%), Postives = 116/234 (49.57%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 +S +P +++ +I +++ ++QA + E + L G+ IA+KD I TT +K L + P A +L G I +GKTN+ E G+S +GV NP+D S++ LC A+G D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + TV DA + +I+G P + P ++ L+ SI +K+G Sbjct: 29 DSDDP--EINSYICTTKDNAIQQAENIDKLIQNEEILPPLAGMPIAIKDNICTKGVHTTCASKMLKGFIAPYESTASD--KLWSSGGICLGKTNLDEFAMGSSTETSVFGVTSNPWDISRVPGGSSGGSAASVAAGLCSAAIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPLDSTCLDQPVPNY-LINLNKSIKDLKIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NATPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gatA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.993e-22 Identity = 70/178 (39.33%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 200 TESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 TE T+ P LDGV +AVKD I TT G++ L P DA V RLR GA +VGKTNM E G GT+ +G NP ++ +ALG D GGSVR PAA CGVVG KPT+G + G++ ++ +G LA TVE+A + I G Sbjct: 8 TEETIEPTDDGP---LDGVTVAVKDNISTDGVRTTCGSEMLADYVP-PYDATVVERLRDAGATIVGKTNMDEFGMGTTTETSAFGPTENPAAEGRVPGGSSGGSAAAVAAGDADLALGSDTGGSVRCPAAFCGVVGIKPTYGLVSRYGLVAYANSLEQIGPLAPTVEEAAELLDVIAG 181
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LYSSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lysinibacillus sphaericus (strain C3-41) GN=gatA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.993e-22 Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 161 FINNNEEDILKQATE-STLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPL 787 F+ +NEE QA E + +++ P L G+ I VKD I TT +K L P DA V +LR G I VGK NM E G+S N +Y +NP++ + + P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED ++ AI G P S V +P + L Sbjct: 43 FLASNEEKATAQAAEMDKVPFEERGP---LFGLPIGVKDNIVTEGLETTCASKILEGFMPIY-DATVVNKLREAGMITVGKLNMDEFAMGSSNENSYYKTTKNPWNLNHVPGGSSGASAASVAAGEVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVEDNALLLEAIAGLDPNDSTSADVEVPNYAAAL 250
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOBB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=gatA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.993e-22 Identity = 70/232 (30.17%), Postives = 110/232 (47.41%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 +++ +I E L QA ++ R GE I+ L G+ + +KD TT G++ L P D V +L+ GA++VGK N E G+S + ++G +NP+D S LG D GGS+R PA+ CG VG KPT+GR+ GV+ ++ VG L V D+ ++ A+ G P +V+ P + + A + IK+G +F Sbjct: 39 QVNAYITVTPEQALVQAEDADRRIAAGE-IAPLTGIPVGLKDIFVTKGIRTTCGSRILENFVP-PYDGTAVAKLKEQGAVIVGKLNQDEFAMGSSNESSYFGPCKNPWDLSCTPGGSSGGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDSALLLGAVAGYDPMDSTSVNTPVPDY-VASLAKGVKGIKIGLPKQYF 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium chlorochromatii (strain CaD3) GN=gatA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.993e-22 Identity = 76/248 (30.65%), Postives = 114/248 (45.97%), Query Frame = 2 Query: 104 ERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKV-SFPLLKSATSISAIKLGKYDAWF 844 E + + E + + + FI E L++A + +G + L G+ +A+KD I T +K L DA ++RL AI +GKTNM E G+S N +G NP+D S++ L VALG D GGSVR PA C +VG KPT+GRI G++ + +G+LA T DA +V + G + T S +V S+ + S +K+G +F Sbjct: 21 EEVVRSYLERIDAAREDNIFITVFHERALERARMLDRKLAEGGTVGKLFGLPMAIKDNIAMKGERLTCASKILENYESVF-DATVILRLEAEDAIFLGKTNMDEFAMGSSNENSAFGNVPNPFDKSRVPGGSSGGSAAAVAANLALVALGSDTGGSVRQPAGFCDIVGLKPTYGRISRFGLVAFASSFDQIGVLARTCGDAALVLEVMAGK-DERDATSSAHQVDSYHSMMERVSPEGLKIGVPQEFF 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SULTO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus tokodaii GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.521e-22 Identity = 62/204 (30.39%), Postives = 103/204 (50.49%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 K+ FI +++ +K+ L+ KG+ L G+LIA+KD I TT ++ L P DA + +L+ GA+++GKTNM E G++ ++G RNP+D + + +ALG D GGS+R PAA V G KP++G + G++ ++ +G +A ED ++Y+ I+G P T+ Sbjct: 37 KIKAFITIRDKEEVKREVREKLKNPKGK----LSGILIAIKDNISTKGIRTTCASRMLEDYVP-PYDATVIEKLKQEGAVILGKTNMDEFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGIVDIALGSDTGGSIRAPAAYNAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLALLYSIISGDDPKDATTI 235
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain AS9601) GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.521e-22 Identity = 68/227 (29.96%), Postives = 109/227 (48.02%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 K++ +I +++ + QA + + E + L G+ IA+KD I TT + L V P A +L G I +GKTN+ E G+S +GV NP+D +++ C A+G D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + TV DA + +I+G P + P ++ L SI +K+G Sbjct: 34 KINSYICTTKDNAIAQAEDIDKLIQNNEKLPPLAGMPIAIKDNICTKGVATTCASNMLKNFVAPYESTASS--KLWSSGGICLGKTNLDEFAMGSSTETSVFGVTSNPWDINRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILHSISGKDPFDSTCLDKPVPNY-LTDLNKSIKGLKIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METI4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylacidiphilum infernorum (isolate V4) GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.521e-22 Identity = 74/249 (29.72%), Postives = 114/249 (45.78%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 +++P V E + + E K+ +I N E L+ + KK + L GV +A+KD I+ P ++ L D+ + +L+ GAIL+G+TNM E G+S N G+ RNP++ ++ ALG D GGS+R PAA CG VG KPT+GR+ G+ ++ +G + TVEDA ++ I+G P + LP F L + LG Sbjct: 19 EVSPLEVVENLLCRIAEVDP---KIFAYIYLNHERALEAS-------KKADISLPLGGVPVAIKDNINVLGEPCRCASRILEGYL-APYDSTVIEKLKKAGAILLGRTNMDEFAMGSSTENSSVGITRNPWNTERVPGGSSGGSAAAVAAHEAFCALGSDTGGSIRQPAAFCGCVGLKPTYGRVSRYGLTAFASSLDQIGPITKTVEDAALLLEVISGFDPFDNTSEKLPVPRFSELLENRPLKDFVLG 256
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DEIGD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.521e-22 Identity = 76/248 (30.65%), Postives = 118/248 (47.58%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWL-HKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFP 784 T D ++A + + TP+ + E A R + ++ I+ N+ +QA +R GE + L GV I VKD ++ TT G++ L + V P DA V RL GA+++GK NM E G+S + +G NP+D ++ L PVALG D GGSVR PAA G+ G KPT+GR+ G++ ++ +G A + D ++ + G P ++ P P Sbjct: 6 TATDLARAVQARETTPQALLE----AARRRAEAARDLNALISLNDRAD-EQAARVQVRLDAGETLP-LAGVPIVVKDNLNVIGTRTTCGSRILANYVSPY--DATAVERLTGAGAVIIGKANMDEFAMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQPAAFTGIYGLKPTYGRVSRYGLVAYASSLDQIGPFARSAADLALLMNVLAGHDPRDATSLDAPPAFRP 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CENSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cenarchaeum symbiosum GN=gatA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.521e-22 Identity = 78/239 (32.64%), Postives = 110/239 (46.03%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 ++++Y + SG T E F E + + +I NE+ L +A R KKGE + G IAVKD I TT +K L DA V RL AI+ GKTNM E G + YG +RNP++ C +LG D GGSVR PA+ CG+VGFKPT+G + G++ ++ +G + TVEDA + I+G P+ T+ Sbjct: 5 SLVEYVREVGSGGTT----CEEFTAGAIERTKK-QGLDAYITLNEK-ALDEARRIDSRIKKGEKVGRCLGAPIAVKDNICVRGMRTTCASKMLEGYES-PYDATVVTRLLAEDAIITGKTNMDEFAMGLTTEFSAYGPSRNPWNKECTPGGSSGGSAAAVGGLECIASLGSDTGGSVRNPASFCGMVGFKPTYGLVSRYGLVSYANSIEQIGPITRTVEDAAFMMDVISGADPNDATTI 236 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |