FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MARAV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gatA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22 Identity = 73/246 (29.67%), Postives = 113/246 (45.93%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPS----KITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 H +V + S+ SG I+ + ++F+ ++ K + FI ++E L +A + G+ +V GV A KD S T+ G+K L P DA + GA+ +GKTNM E G+S + YG NP+ S ++ L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T EDA ++ + G P + Sbjct: 2 HNKSVAELSRELESGRISSVELTQQFLDRLKTEDG---KYNSFITISDEQALAEARAADEMRAAGKA-TVWTGVPFAHKDIFCTSGIRTSCGSKMLDNFVP-PYDATVTANFKAAGAVCLGKTNMDEFAMGSSNESSFYGAVTNPWGLSGGDKRVPGGSSGGSAAAVAARLVPAATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGGPMARTAEDAALMLNVMAGHDPKDSTCI 242
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLPB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium phaeobacteroides (strain BS1) GN=gatA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22 Identity = 75/261 (28.74%), Postives = 118/261 (45.21%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 K S +I+ V ++ +R++ + ++ F + L++A E + + GE L G+ +AVKD + T +K L +A V RL A+ +GK NM E G+S N +G NPYD S++ L VALG D GGSVR PA C VVG KPT+GRI G++ + +GIL+ +DA +V I G + + + + S+ +K+G + +F Sbjct: 11 KRLLSREISCETVVLDYLERIRKNHERNVYITVF----NDQALQRAKELDRKLEAGEQPGRLFGLPMAVKDNLSVKDASLTCASKILEGYT-AVYNATAVERLLKEDAVFLGKVNMDEFAMGSSNENSAFGPVPNPYDDSRVPGGSSGGSAAAVAGDLAMVALGSDTGGSVRQPAGFCNVVGLKPTYGRISRYGLVAFGSSFDQIGILSRNCDDAALVLGVIAGKDAADTTSSQHVVPDYLSEMGSVSLKGMKIGVPEEYF 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRZT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRZP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain P1031) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRR6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain CGSP14) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain 70585) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDANNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |