FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCTU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium tuberculosis GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 F++ ++ L A + GEP+ S L GV +A+KD S PTT G+K L R DA RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V Sbjct: 44 FLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRS-PYDATLTARLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSV 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 F++ ++ L A + GEP+ S L GV +A+KD S PTT G+K L R DA RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V Sbjct: 44 FLHVAADEALAAAAAIDKQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRS-PYDATLTARLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSV 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCBT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 F++ ++ L A + GEP+ S L GV +A+KD S PTT G+K L R DA RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V Sbjct: 44 FLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRS-PYDATLTARLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSV 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCBP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 F++ ++ L A + GEP+ S L GV +A+KD S PTT G+K L R DA RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V Sbjct: 44 FLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRS-PYDATLTARLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSV 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCBO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium bovis GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV 760 F++ ++ L A + GEP+ S L GV +A+KD S PTT G+K L R DA RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V Sbjct: 44 FLHVAADEALAAAAAVDKQVAAGEPLPSALAGVPLALKDVFTTSDMPTTCGSKILEGWRS-PYDATLTARLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSV 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MARMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinomonas sp. (strain MWYL1) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 66/232 (28.45%), Postives = 112/232 (48.28%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 +++ FI +E+ L+QA + + + G+ S L G+ +A KD TT G+K LH P ++ R++ GA+++GKTNM E G+S N YG +NP++ + L A G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G +A + ED + A+ G + P + L + ++ +K+G +F Sbjct: 37 QLNSFITVSEQHALEQAAAADVLLQSGKGTS-LTGIPVAHKDLFCTEGTLTTCGSKMLHNFVP-PYESTVTSRIQQAGAVMLGKTNMDEFAMGSSNENSFYGAVKNPWNLDMVPGGSSGGSAAAIAAGLAVAATGTDTGGSIRQPASFCGITGLKPTYGRVSRFGMIAYASSLDQGGPMAKSAEDCAHLMQAMAGFDEKDSTSADKPADDY-LANLNSPLTGLKIGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACPL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus plantarum GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 67/195 (34.36%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 K+ F+N NEE L+QA + L + +V G+ +AVKD I TT +K L P +A V +L A++VGKTNM E G S + V RNP+D S++ PVALG D GGS+R P++ G+VG KPT+GR+ G++ ++ +G + TV+D I G Sbjct: 39 KLGAFLNLNEEQALQQA--AALDQDGIDANNVFAGIPMAVKDNIVTKGLTTTAASKMLENFVPVY-NATVVDKLLASNALIVGKTNMDEFAMGGSTETSAFHVTRNPWDISRVPGGSSGGSAVAVASGQVPVALGSDTGGSIRQPSSFNGIVGMKPTYGRVSRWGLIAFGSSLDQIGPMTRTVKDNAAALNMIAG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gatA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 70/231 (30.30%), Postives = 115/231 (49.78%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGE-PISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 T ++ SK +++ + +A+++ P S+ I NEE+ L+QA++ + + G+ S L GV IA+KD I TT +K L P +A + RL+ GAI++GKTNM E G++ ++G +NP++ I +ALG D GGS+R P+A CGV G KPT+G + G++ ++ +G +A +V D I+G Sbjct: 7 TAIELSKKIKQKELSVEEAVKATFSAIKKRE--PYYHSY-ITVNEEEALEQASKIQIAIEAGKFADSPLAGVPIAIKDNICVKGMRTTCASKILEDFIP-PYNASVIERLKDAGAIILGKTNMDEFAMGSTTETSYFGATKNPWNIECIPGGSSGGSAAAVAAEEAFIALGTDTGGSIRQPSAFCGVTGIKPTYGTVSRYGLVAYASSLDQIGPIARSVSDCAATLQVISG 233
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_AQUAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Aquifex aeolicus GN=gatA PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21 Identity = 77/253 (30.43%), Postives = 118/253 (46.64%), Query Frame = 2 Query: 77 GDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 G+++P+ V E F ++ K+ +I LKQA R L G+ IAVKD I TT +K L V P DA + RL+ GA++VGKTN+ E G+S + +NP+D ++ PV+LG D GGS+R PA+ CGV+G KPT+GR+ G++ ++ +G+ ED +V I+G S V +P+ S + K + +K+G Sbjct: 17 GEVSPKEVVESFYDRYNQTEE---KVKAYITPLYGKALKQAESLKERELP------LFGIPIAVKDNILVEGEKTTCASKILENFVAPY--DATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDSTSAKVPVPEWSEEVKK---EVKGLKIG 255 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |