FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BIFLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum (strain DJO10A) GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.897e-21 Identity = 71/250 (28.40%), Postives = 123/250 (49.20%), Query Frame = 2 Query: 53 DYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEP-ISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA 799 + + A GD+T R + E + + E++ P +K F+ + + L+QA + + + + L GV IA+KD I TT +K L P DA + +L+ G ++GKTN+ E G+S + Y NP+D ++ P+ALG D GGS+R P AL G VG KPT+G + G + + ++ +G ++ TV D+ ++ I G ++ + S+P+ P++ +A Sbjct: 15 EQAAAVKKGDVTSRELVEAHLKVI-EAAEPSIKA--FLKVSGDVALEQADAFDAKSAEDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVP-PYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGG--HDKRDSTSIPEGPRPMVAAA 258
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ALHEH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gatA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.897e-21 Identity = 71/233 (30.47%), Postives = 106/233 (45.49%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H TV + + A +G+ + R V E F+ + ++ NP I E L A + R GE L GV + KD T+ G++ L DA V +L G +++GK NM E G+S +YG +NP+D + L P A G D GGS+R PAALCG+ G KPT+GR+ G++ ++ G +A T ED ++ + G Sbjct: 2 HEKTVAEIAAALRAGEFSSREVTEAFLARI-DALNPVTNA--VITPTPEQALAAADAADQRIAAGEA-GPLTGVPLVHKDIFCTQGVRTSCGSRMLDNFT-APYDATVVGKLADAGMVMLGKANMDEFAMGSSNETSYYGPVKNPWDLDAVPGGSSGGSAAAVAGRLAPAATGTDTGGSIRQPAALCGLSGLKPTYGRVSRYGMIAFASSLDQGGPMARTCEDLALLLGGMAG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_PANAY (Indoleacetamide hydrolase OS=Pantoea agglomerans pv. gypsophilae GN=iaaH PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21 Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 2 Query: 182 DILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGV-----DGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 D +Q ++++ +K G L G+ ++ KD I P T GT + T DA V +L+ GA++ GK NMHEL G + +N +G A NP P P + G+ D GGSVR+PAA CG+ GF+PT GR SG++P++ T G+L TV+DA +Y I+G Sbjct: 46 DAEEQFSKASDAFKGG----ALWGIPVSFKDNICVKDLPVTAGTPGMTGCI-ATHDAFIVKKLKSLGAVVAGKNNMHELSFGITSVNVQWGTAGNPAAPGYCAGGSSGGCVSR------PWSAGLYRSPSDTGGSVRIPAAFCGIAGFRPTTGRWASSGIIPVSHTKDAPGLLTRTVKDAAFLYGLISG 223
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LAWIP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=gatA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21 Identity = 63/189 (33.33%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 FI E+ L +A + L +P L G+ IAVKD I PTT + L P DA + +L+ GAI++GKTN+ E G+S +G NP++ + C A+G D GGS+R PAALCG +G KPT+GR+ G++ ++ G + TVEDA ++ + + Sbjct: 44 FITICAEEALSEAKK--LDQSTPDPKKPLWGIPIAVKDNILTKNIPTTAASCMLKHFIP-QYDAFIIQQLKNAGAIIIGKTNLDEFAMGSSTETSFFGPTYNPWNTKCVPGGSSGGSAASVAAFQCFSAIGTDTGGSIRQPAALCGCIGLKPTYGRVSRYGIIAYASSLDQAGPITRTVEDAAIMLSVL 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ACIBT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=gatA PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21 Identity = 68/272 (25.00%), Postives = 121/272 (44.49%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 HR ++ + ++ S + R + E ++ + + +P +K ++ E L++A + K G + L G+ +A KD TT G+K L + P DA V + + G + +GK NM E G++ + + G NP+ + L P A G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G +A + ED + I G +V + + TS+ +++G +FN Sbjct: 5 HRLSIRELAEGLSQAKFSSRELTEHYLKRIAKI-DPQVKS--YVTVTSEQALREADAADAALKAGNA-TALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPY--DATVVEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDAKDSTSVKKEVDDYVANLNGTSVKGLRIGIPKQYFN 270
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNS9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9902) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 79/264 (29.92%), Postives = 120/264 (45.45%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWL-HKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQP--TVSLPKVSFPLLKSATSISAIKLG 826 T+ + + +GDI+ R + ++ I + E++ P +S + E A GE + L G+ +A+KD + TT ++ L H V P A RL G +LVGKTN+ E G S +G NP++ + C +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG A +V DA + I GP P V +P S L + SI +K+G Sbjct: 7 TISAWRQQLQNGDISSRELVDQHIERL-ETAEP--SLSVYNEITVERARADADRIDAARAAGESLGPLAGLPLAIKDNLCTRGVRTTCSSRMLEHFVPPYESTA--TERLWQAGGVLVGKTNLDEFAMGGSTETSAFGATHNPWNLDHVPGGSSGGSAAAVASGSCIASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFATSVADAAELLQVIAGPDPRDSTCLNVEVPDYSAGLNQ---SIKGLKVG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNS3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain CC9311) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 73/263 (27.76%), Postives = 123/263 (46.77%), Query Frame = 2 Query: 47 VLDYSKAYSSGDITPRMVAERF---ITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 + ++ + SG+++ R + + I AV S + ++++ + D L +A + GE + L GV IA+KD + TT ++ L P ++ RL GA+L+GKTN+ E G S +G NP++ + C +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG A +V DA + AI G P + P ++ + S+S +++G Sbjct: 3 IAEWRQQLESGEVSARELTDHHLARIKAVDSSVHAFLEVTADRARADADRLDEARAA------GEDLPPLAGVPIAIKDNLCTKGIRTTSSSRMLESFVP-PYESTVTDRLWRSGAVLIGKTNLDEFAMGGSTETSAFGPTANPWNTGYVPGGSSGGSAAAVAAGECMASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQVGPFATSVSDAAELLQAIAGEDPRDSTCLKAPVPNYREV-LGRSVSGLRIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 70/233 (30.04%), Postives = 113/233 (48.50%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L + P ++ + +L A+L+GK NM E G S ++ NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + S+ V F Sbjct: 20 IKPSDVVKDVYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEEFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSASVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROM0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9301) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 68/227 (29.96%), Postives = 109/227 (48.02%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 +++ +I +++ + QA + E + L G+ IA+KD I TT +K L V P A +L G I +GKTN+ E G+S +GV NP+D +++ C A+G D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + TV DA + +I+G P + P ++ L SI +K+G Sbjct: 34 EINSYICTTKDNAIAQAENIDKLIQFKEKLPPLAGMPIAIKDNICTKGVATTCASKMLKNFVAPYESTASS--KLWSSGGICLGKTNLDEFAMGSSTETSLFGVTSNPWDINRVPGGSSGGSAASVAAGFCAAAIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPITNTVSDAAEILYSISGKDPFDSTCLDKPVPNY-LTHLNKSIKGLKIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NEOSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neorickettsia sennetsu (strain Miyayama) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 2 Query: 176 EEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 EE+ ++A + R K+GE ++ L G+ +KD TT ++ L P T ++ +L GA+++GK NM E G+S + +G +NP K + P +LG D GGSVR PA+ CG+VG +PT+GR G++PL ++ GIL+ VED V+ I+G Sbjct: 49 EEEARQRAKLADERLKRGESVNTLTGIPCVIKDMYCTKGVRTTAASRALRNFVP-TYESTVTSKLIDAGAVMLGKANMDEFAMGSSNTSSFFGPVKNPLKGKKGVDLVPGGSSGGSAAAVADYYSPFSLGSDTGGSVRQPASFCGLVGLRPTYGRCSRWGMIPLANSLDQAGILSRNVEDNAAVFEVISG 237 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |