FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOUR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter uraniireducens (strain Rf4) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 71/232 (30.60%), Postives = 107/232 (46.12%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 +++ FI E+ LK A + R G+ + +L G+ IA+KD TT ++ L P DA V RL+ G +LVGK N E G+S + +YG NP++ I LG D GGS+R PA+ CG VG KPT+GR+ GV+ ++ VG + V D ++ A+ G P +V LP + S + +K+G +F Sbjct: 39 RVNAFITVTPEEALKNAEAADRRIAAGD-MQLLTGIPIALKDIFLTKGVRTTCASRILDNFIP-PYDATSVARLKAQGMVLVGKLNQDEFAMGSSTESSYYGKTHNPWNLECIPGGSSGGSAAAIAARQAIATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLGAVAGFDPKDSTSVDLPVPDYSKALS-NDVKGLKIGLPKEYF 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_AZOSE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 69/207 (33.33%), Postives = 100/207 (48.31%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 ++ FI + + L+ A + R G+ L G+ +A KD TT G+K L V P DA V L+ GA+ +GKTNM E G+S N H+G A+NP+D ++I L P+A G D GGSVR PAAL GV G KPT+G + G++ ++ G A+ D + A+ G P ++ P Sbjct: 38 LNAFITVDRDGALEAARAADARIAAGDA-GPLTGIPLAHKDVFCTEGVLTTCGSKMLANFVSPY--DAHVVSLLKTAGAVSLGKTNMDEFAMGSSNENSHFGPAKNPWDTTRIPGGSSGGSAAAVAARLVPIATGTDTGGSVRQPAALTGVTGIKPTYGVVSRYGMIAYASSLDQGGAFGASAADCAQLLTAMAGFDPRDSTSLERP 241
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_AZOSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain BH72) GN=gatA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 78/255 (30.59%), Postives = 117/255 (45.88%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATS 805 +V + +A + ++ +A F+ + E NP + FI + E L A + R G L G+ +A KD TT G+K L V P DA V RL+ GA+ +GKTNM E G+S + HYG RNP+D ++I L P+A G D GGSVR PA+ GV G KPT+G + G++ ++ G A+ ED ++ A+ G P + P + + T+ Sbjct: 5 SVSELRRALDTRQVSSVELATLFLDRIAER-NPALNA--FITIDREGALAAARAADARIAAGTA-GPLTGIPLAHKDLFCTEGVLTTCGSKMLADFVSPY--DAHVVSRLKDAGAVSLGKTNMDEFAMGSSNESSHYGAVRNPWDTTRIPGGSSGGSAAAVAARLVPLATGSDTGGSVRQPASHTGVTGIKPTYGVVSRYGMIAYASSLDQGGAFGASAEDCALLLTAMAGFDPRDSTCLDRPAEDYAAALAPTA 253
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRZJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain JJA) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 64/192 (33.33%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N ++ SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWNHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 64/192 (33.33%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAI 727 ++ F+ EE L QA + + +VL G+ +AVKD I TT +K L+ P DA V + G I+VGKTNM E G SG HYG +N ++ SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G A TV++ ++ AI Sbjct: 40 LNSFVTIAEEQALVQA--KAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWNHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAI 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 75/265 (28.30%), Postives = 123/265 (46.42%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 H+ T+ + ++A + + + + +R+ +++ FI+ ++ + QA + R GE ++L G IA KD T+ G+K L V P DA V +L GA+ +GK NM E G+S + HYG +NP+ ++ L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA T ED ++ + G P +V P V L +S +++G Sbjct: 3 HQLTLAEIARALADKQFSAEELTRTLLGRIRQLDP---QLNSFISITDDLAIAQAKAADERRANGENGALL-GAPIAHKDLFCTQGVRTSCGSKMLDNFVSPY--DATVVEKLTAAGAVTLGKLNMDEFAMGSSNQSSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGVMAGFDPKDSTSVEQP-VDDYLAALQKPLSGLRIG 260
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Propionibacterium acnes GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 66/213 (30.99%), Postives = 99/213 (46.48%), Query Frame = 2 Query: 188 LKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 L A R GE + L GV +AVKD TT ++ L P D+ V R + G +++GKTN+ E G+S +G NP+D ++ P+ALG D GGS+R P A+ G VG KPT+G GV+ + ++ G A TV DA +++ AI G Q T++ P + T +S +++G Sbjct: 53 LDAARRIDARIADGEHLGPLAGVPLAVKDLFCTKGIATTASSQMLEGWIP-PYDSTIVTRCKDAGMVILGKTNLDEFAMGSSTETSAFGPTHNPWDLERVPGGSGGGSAASLASFQAPLALGTDTGGSIRQPGAVTGTVGIKPTYGSTSRYGVIAMASSLDTPGPCARTVLDAALLHQAIAGHDAMDQTTINQPTPAVVEAARQTDVSGVRIG 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PELPB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 66/230 (28.70%), Postives = 103/230 (44.78%), Query Frame = 2 Query: 155 SFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 + +I + L++A + ++G L G+ +A+KD I T +K L DA V+RL AI +GKTNM E G+S N +G NP+D +++ L VALG D GGSVR PA C +VG KPT+GRI G++ + +G+L +D +V + G + P + + S+ +K+G +F Sbjct: 38 NIYITVFHDQALERARTLDRKLREGGNPGKLFGMPMAIKDNIAMKNCRLTCASKILENYESVY-DATAVLRLEEADAIFLGKTNMDEFAMGSSNENSAFGNVPNPFDKTRVPGGSSGGSAAAVANGLALVALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLGLNCDDVALVLGVMAGKDEGDATSSRHPVADYASEMATLSVDGLKIGVPKEYF 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus acidophilus GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 72/240 (30.00%), Postives = 117/240 (48.75%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATES-TLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKV 775 +K +SG+++ +A+ + ++E+ K++ +I +L A + L Y K S L G+ IA+KD I + TT + L+ P DA + +L+ GA VGKTNM E G+S + +YG NP++ K+ ALG D GGS+R PAA G+ G KPT+GR+ G++ ++ +G++ V+D+ V I G TVS+ +V Sbjct: 12 NKKLASGELSADKLAKDTVANIKETDK---KLNAWIT-----VLDDAKPAENLDYSK----SKLAGIPIAIKDNIITNGVKTTAASHMLYNYMPMY-DATVISKLKKAGATFVGKTNMDEFAMGSSTEHSYYGATHNPWNLDKVPGGSSGGSAAAVAGGQVVAALGSDTGGSIRQPAAFNGIFGIKPTYGRVSRWGLIAFGSSLDQIGVMTKRVKDSAEVLNVIAGG-DEHDSTVSVREV 237
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gatA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 75/266 (28.20%), Postives = 120/266 (45.11%), Query Frame = 2 Query: 53 DYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVS-FPLLKSATSISAIKLGKYDAWFN 847 D + +G T V + ++ + + + ++ F E L +A R+ +G +L G+ +A+KD I T ++ L DA + RL A+ +GKTNM E G+S N +G NP+D +++ L VALG D GGSVR PA C +VG KPT+GRI G++ + +G+LA +DA +V + G + T S VS + +A S +K+G +F+ Sbjct: 8 DLRSSLLAGQTTCEEVTKSYLERIDRHCDDNIFLAVF----HEQALSRARSLDRRFSEGGTPGLLFGMPMAIKDNISIKGARLTCASRILENYESVY-DATVIERLLNEDAVFIGKTNMDEFAMGSSNENSAFGPVANPFDKTRVPGGSSGGSAAAVAAGLALVALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLARNSDDAALVLGVMAG-ADERDATSSRHAVSNYAEEMAAVSPDGLKIGVPKEFFH 267 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |