FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_VESOH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 69/234 (29.49%), Postives = 110/234 (47.01%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H T+++ K + D + + + +++ + +S K++ FI +E L QA + + G S+L G+ A KD T+ G+K L + P DA +L +++GKTNM E G+S N Y +NP++ KI L A G D GGS+R PA+LCG+ G KPT+GRI G++ + GI+ T +DA +V + G Sbjct: 2 HTKTIVELYKGLKNKDFSCVELTQYYLSRINQS-----KLNAFITVTDELALVQAQVADDKIALGNA-SILTGIPYAHKDIFCTKGVKTSAGSKMLDTFIAPY--DATVSQKLNQMNLVMLGKTNMDEFAMGSSNENSFYNAVKNPWNYLKIPGGSSGGSAASVAGGLSCFATGTDTGGSIRQPASLCGITGLKPTYGRISRYGIIAYASSFDQAGIMTKTSQDAAIVLNIMAG 227
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_TROWT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Tropheryma whipplei (strain Twist) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 80/267 (29.96%), Postives = 121/267 (45.32%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLK---SATSISAIKLG 826 HR L SK S+ + VAE FI + S + + + D+ ++ E K +S L GV IAVKD I PTT G+K L P +A + R+ ++GKTN E G G+S Y RNP+D S+ P+ALG D GGS+R+PA G VG +PT+G + GV+ L + VG ++ + DA +++ I G P+ ++ ++F + IS ++LG Sbjct: 39 HRLAALIRSKEVSALE-----VAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEEL---KSATKLSPLAGVPIAVKDMILTRDMPTTAGSKILEGWIP-PYNATVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTVGIRPTYGSVSRYGVIALASSFDQVGPCSSNILDAALLHEVIAGYDPADAVSIKDQDLNFSQAAYEGANRGISGVRLG 296
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_TROW8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Tropheryma whipplei (strain TW08/27) GN=gatA PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 80/267 (29.96%), Postives = 121/267 (45.32%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLK---SATSISAIKLG 826 HR L SK S+ + VAE FI + S + + + D+ ++ E K +S L GV IAVKD I PTT G+K L P +A + R+ ++GKTN E G G+S Y RNP+D S+ P+ALG D GGS+R+PA G VG +PT+G + GV+ L + VG ++ + DA +++ I G P+ ++ ++F + IS ++LG Sbjct: 39 HRLAALIRSKEVSALE-----VAESFIDNIEASDSRICAFLYTDFSYTRDVARRVDEEL---KSATKLSPLAGVPIAVKDMILTRDMPTTAGSKILEGWIP-PYNATVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSASQAPLALGTDTGGSIRLPAHCTGTVGIRPTYGSVSRYGVIALASSFDQVGPCSSNILDAALLHEVIAGYDPADAVSIKDQDLNFSQAAYEGANRGISGVRLG 296
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THETN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter tengcongensis GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 69/246 (28.05%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 TV + + +++ + V + ++ ++E K+ + EE L++A + K GE L G+ + +KD I TT +K L P +A V RL G +++GK+N+ E G+S N + +NP+D S++ ALG D GGS+R PA+LCGVVG KPT+G + G++ ++ +G V D +V AI G P +V + K + Sbjct: 7 TVHELKELLHKREVSAQEVTKSYLERIKEVEP---KIDALVTITEEFALERAKVADEMIKNGEAKD-LTGIPVIIKDNISTEGIRTTCSSKMLENYIP-PYNATVVERLLNEGVVILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNAIAGHDPMDSTSVKIEKPDY 247
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THEP3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 67/246 (27.24%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ + + +++ V + ++ ++E K+ I E+ L++A E+ + K GE + L G+ + +KD I TT +K L P +A V +L G I++GK+N+ E G+S N + +NP+D S++ ALG D GGS+R PA+LCGVVG KPT+G + G++ ++ +G V D +V I G P ++ + K + Sbjct: 7 TIHELRELLKKREVSALEVTKSYLERIKEVEP---KIDALITITEDFALQRAKEADEKIKNGED-TALTGIPVIIKDNISTEGIKTTCSSKMLENYIP-PYNATVVEKLLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKDSTSLKIDKPDY 247
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 69/241 (28.63%), Postives = 115/241 (47.72%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 S+ + +I P V + A+ E+ +P +K F+ ++++ +K+A E KG+ L G+ + +KD I TT +K L P ++ + +L AIL+GK NM E G S ++ NP+D + + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + V+D +V I+G + + + V F Sbjct: 12 SEMIKNNEIKPSEVVKDIYDAIEET-DPTIKS--FLALDKDNAIKKAKELDELQAKGQMEGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIY-ESTVMNKLHDENAILIGKLNMDEFAMGGSTETSYFKQTVNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAIVLETISGVDRNDSTSAPVEDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEA7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain PA7) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 76/271 (28.04%), Postives = 125/271 (46.13%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + ++A + + + + +R+ +++ FI+ ++ + QA + R GE ++L G IA KD T+ G+K L V P DA V +L G + +GK NM E G+S + HYG +NP+ ++ L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA T ED ++ A+ G P +V P V L +S +++G +F Sbjct: 3 HQLTLAEIARALADKRFSAEELTRTLLGRIRQLDP---QLNSFISVTDDLAIAQAKAADERRANGENGALL-GAPIAHKDLFCTQGVRTSCGSKMLDNFVSPY--DATVVEKLAAAGTVTLGKLNMDEFAMGSSNQSSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALMLGAMAGFDPKDSTSVEQP-VDDYLAALQKPLSGLRIGLPKEYF 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROM5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9515) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 72/265 (27.17%), Postives = 123/265 (46.42%), Query Frame = 2 Query: 56 YSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 + K SG+ + + + F + +S +P K++ + +E Q+ + E + L G+ IA+KD I T+ +K L V P ++ +L G I +GKTN+ E G+S +G NP+D ++ LC ++G D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + TV DA + +++G P + P ++ L SI +K+G + FN Sbjct: 6 FRKEIKSGNASVKELINEFFLKI-DSLDP--KINAYTCLTKEIANSQSEQIDKLISNNEQLPPLAGIPIAIKDNICTKGVVTSCSSKMLQDFVSPY--ESTVSGKLWSSGGIFLGKTNLDEFAMGSSTETSVFGTTSNPWDTKRVPGGSSGGSAASVAAGLCAASIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLIAFASSLDQIGPITNTVSDAAEILYSMSGKDPLDSTCLDKPVPNY-LSDLDKSIKGLKIGIIEECFN 264
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NEIMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup A GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 70/249 (28.11%), Postives = 119/249 (47.79%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 ++T+ S S I+ +A ++ A+ E NP + + +I +++ L +A + R +G S L G+ +A KD + + + +K L + P T A V +L G + +G+TNM E G++ N YG A+NP++P + L P ALG D GGS+R PA+ CG+ G KPT+G + G++ + G +A T ED ++ A+ G P ++ K + Sbjct: 3 QYTLKQASVLLQSKQISAVELASAYLAAIAEK-NPAL--NGYITIDQDKTLAEARAADERIAQGNA-SALTGIPVAYKDIFCQTGWRSACASKMLDNFISPYT--ATVVQKLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDY 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCA9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.520e-21 Identity = 69/203 (33.99%), Postives = 94/203 (46.31%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 F++ E L A + G S L GV +A+KD PTT G+K L P DA RLR G ++GKTNM E G+S N YG RNP+D ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V P Sbjct: 44 FLHVAGEQALAAAKDVDDAIAAGSVPSGLAGVPLALKDVFTTRDMPTTCGSKILENWVP-PYDATVTARLRGAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWDVERVPGGSGGGSAAALAAFQAPLAIGTDTGGSIRQPAALTATVGVKPTYGTVSRFGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVDEP 245 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |