FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAAM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gatA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 69/233 (29.61%), Postives = 112/233 (48.07%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P++LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 69/233 (29.61%), Postives = 112/233 (48.07%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P++LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RUBXD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 69/208 (33.17%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 ++ FI E L++A R ++GE + + V IAVKD + TT G++ L P +A ++ I+VGK NM E G+S N YG RNP+D S++ ALG D GGSVR PA+ CG+VG KPT+GR+ G++ ++ +G + V DA ++ AI G P S V +P Sbjct: 38 LNSFITGTPELALERAARVDERLRRGEEVRPWECVPIAVKDVLSTRGVRTTCGSRILENFEPVY-EASALLSFGP-DPIMVGKANMDEFAMGSSTENSAYGPTRNPWDLSRVPGGSSGGSAAAVAAGQGWWALGTDTGGSVRQPASFCGLVGLKPTYGRVSRYGLIAFASSLDQIGPMTRDVRDAALLLQAIAGHDPKDSTSAGVEVP 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCGI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium gilvum (strain PYR-GCK) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 72/234 (30.77%), Postives = 106/234 (45.30%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 SS +++ V + F+ + + F++ E L A GE + S L GV +A+KD + PTT G+K L DA +LR G ++GKTNM E G+S N YG RNP+D ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V P Sbjct: 17 SSKEVSSAEVTQAFLDQIAATDGD---YHAFLHVGAEQALAAAQTVDRAVAAGEHLPSPLAGVPLALKDVFTTTDMPTTCGSKVLEGWTS-PYDATVTAKLRSAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWDTERVPGGSGGGSAAALAAFQAPLAIGTDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAGHDPLDSTSVEAP 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METBF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 67/185 (36.22%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 179 EDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E L+QA + + G L GV IA+KD I P + G+K L P +A + +L GA+++GKTNM E G+S ++G NP+D ++ P ALG D GGSVR PAA CGVVG KPT+G + GV+ ++ VG LA V D V+ I G Sbjct: 43 EKALEQAKKIDVEGHNGP----LAGVPIAIKDNISVVGLPNSCGSKILEDYIP-PFNAYVIEKLLAAGAVILGKTNMDEFAMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDIAVLMDVIAG 222
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 62/163 (38.04%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 L GV IA+KD I P + G+K L P +A + +L GA+++GKTN+ E G+S +YG NP+D ++ P ALG D GGSVR PAA CGVVG KPT+G + GV+ ++ VG LA VED ++ I G Sbjct: 62 LAGVPIAIKDNISVVGLPNSCGSKILEGYVP-PFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAG 223
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 64/191 (33.51%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE L++A + R K + S+LDG+ I +KD I TT +K L P +A + +L G I VGK NM E G+S N + + +N +D +K+ +LG D GGS+R PAA G+VG KPT+GR+ G++ ++ +G L TV+D +V AI+G Sbjct: 43 FLKLDEERALEKARKIDERGVKAD--SILDGIGIGIKDNIVTKDLTTTAASKMLENFEPIY-NATVMDKLNDAGMITVGKLNMDEFAMGSSTENSAFKITKNVWDTTKVPGGSSGGSAAAVASGQVLASLGSDTGGSIRQPAAFNGIVGVKPTYGRVSRYGLIAFASSLDQIGPLTRTVKDNALVLNAISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_HERAR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Herminiimonas arsenicoxydans GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 69/224 (30.80%), Postives = 105/224 (46.88%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 H T+ + S + I+ +A+ F+ + S ++ F++ +E L+QA + R G VL G+ IA KD + +T G+K L V P DA V G + +GK N E G+S N ++G +NP+D + I L P + D GGS+R PAALCGV G KPT+GR+ G++ ++ G +A T ED Sbjct: 2 HTKTIKELSALLQTKKISATELAQLFLKRMGASD-----LNAFLHVDEALTLQQAAAADQRIASGNA-GVLTGIPIAHKDIFVTRNWRSTAGSKMLENYVSPF--DATVVENFNQAGMVTLGKLNCDEFAMGSSNENSYFGAVKNPWDKTAIPGGSSGGSAAAIAARLTPASTATDTGGSIRQPAALCGVTGIKPTYGRVSRFGMIAFASSLDQGGPIAKTAED 217
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EXIS2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 67/195 (34.36%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 K+ F++ NE+ + + + P L G+ I VKD I TT G+K+L P DA V RL GAI +GK NM E G+S N Y RNP++ + +LG D GGS+R PAA CGVVG KPT+G + G++ ++ +G L TVED + +AI G Sbjct: 39 KIGAFLSLNEDAFEQAKRMDEIAKHEANP---LFGLPIGVKDNIVTKGMTTTCGSKFLENFVPAH-DATVVERLHEAGAITIGKLNMDEFAMGSSNENSAYKPVRNPWNTKHVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGLVSRYGLVAFASSLDQIGPLTRTVEDNAYLLSAIAG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CLOCE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.416e-21 Identity = 73/264 (27.65%), Postives = 123/264 (46.59%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 R T+ + K + +I+ + ++ + K+ +++ E+ LKQA ++ G+ S+L G+ +++KD I TT +K L V P T A V +L A+++GKTN+ E G S N + + +NP+D +++ L +LG D GGSVR PA+ CGVVG KPT+G + G++ + +G +A TVED ++ +I G P ++ S + I K G Sbjct: 5 RLTIKEARKLLDNREISALELTRTYLDRINTLDG---KVESYLSVTEDMALKQAEQAQNLIDYGKA-SLLTGIPLSIKDNICIEGTKTTCASKMLEDFVSPYTATA--VDKLFADNAVILGKTNLDEFAMGGSTENSAFKITKNPFDLTRVPGGSSGGSAACVSASLALGSLGSDTGGSVRQPASFCGVVGMKPTYGLVSRYGLVAFASSFDQIGPIAKTVEDCAIILDSICGNDPKDATSLKYENDSSYSSSVSGDIKGFKFG 262 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |