FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACRJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus reuteri (strain JCM 1112) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 66/191 (34.55%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 FI+ NE+ LK+A E + + ++ GV +AVKD I TT +K L P DA V +L I VGKTN+ E G+S N + NP+D +++ ALG D GGS+RMPA+ GVVG KPT+GR+ G++ + VG L V+D ++ A I+G Sbjct: 43 FISLNEDQALKRAAEIDAKGISADQLTA--GVPLAVKDNILTKGLTTTAASKMLENFNPVY-DATVVEKLNAADYINVGKTNLDEFAMGSSTENSAFFTTHNPWDLTRVPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMPASFNGVVGMKPTYGRVSRWGIIAFGSSFDQVGWLTQNVKDNALLTALISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus reuteri (strain DSM 20016) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 66/191 (34.55%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 FI+ NE+ LK+A E + + ++ GV +AVKD I TT +K L P DA V +L I VGKTN+ E G+S N + NP+D +++ ALG D GGS+RMPA+ GVVG KPT+GR+ G++ + VG L V+D ++ A I+G Sbjct: 43 FISLNEDQALKRAAEIDAKGISADQLTA--GVPLAVKDNILTKGLTTTAASKMLENFNPVY-DATVVEKLNAADYINVGKTNLDEFAMGSSTENSAFFTTHNPWDLTRVPGGSSGGSAAAVAAGDVLGALGTDTGGSIRMPASFNGVVGMKPTYGRVSRWGIIAFGSSFDQVGWLTQNVKDNALLTALISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CHLL2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 68/255 (26.67%), Postives = 112/255 (43.92%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 I+ R+ E+ + E + + +I E +++A + + +G L G+ +A+KD I T ++ L DA V RL A+ +GKTNM E G+S N +G NP+D +++ L ALG D GGSVR PA C +VG KPT+GRI G++ + +G+LA +DA +V + G + + +A + +K+G +F+ Sbjct: 14 ISRRITCEKVVLDYLERIDRHRDDNIYITVFHEQAVEKARKLDKKLSEGGLPGKLFGMPMAIKDNISIKGAGLTCASRILENYESVY-DATAVQRLEAEDAVFLGKTNMDEFAMGSSNENSAFGAVPNPFDKTRVPGGSSGGSAAAVAAGLALAALGSDTGGSVRQPAGFCDIVGLKPTYGRISRYGLVAFASSFDQIGVLARNCDDASLVLGIMAGKDEHDATSSHRDVPDYAADMAAVRVEGLKIGVPKEYFH 267
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus pumilus (strain SAFR-032) GN=gatA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 64/195 (32.82%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 K+ F+ +EE A E + + + +L G+ I VKD I TT +K L P DA V RLR + +GK NM E G+S N Y +NP++ + + P +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + VED V AI G Sbjct: 39 KVQAFLALDEEKARAYAKELDEAVGEKDELGLLFGMPIGVKDNIVTKDLRTTASSKILQNFDPIY-DATVVNRLRDAEVVTIGKLNMDEFAMGSSTENSGYKATKNPWNLNTVPGGSSGGSAASVAAGEVPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPITRNVEDNAYVLQAIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: AMIA2_MYCTU (Putative amidase amiA2 OS=Mycobacterium tuberculosis GN=amiA2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 69/185 (37.30%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 179 EDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E L A + R G+ +L G+ IAVKD++D + PT GT+ V P T D V RL+ GA++VGKTN ELG P +G RNP+ L A+G DG GS+R+PAA +VG KP GRI + V + G+LA TVEDA +V A +G Sbjct: 64 ESALADAAAADKRRAAGDTAPLL-GIPIAVKDDVDVAGVPTAFGTQGY--VAPATDDCEVVRRLKAAGAVIVGKTNTCELGQWPFTSGPGFGHTRNPWSRRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIRIPAAWTHLVGIKPQRGRISTWPLPEAFNGVTVNGVLARTVEDAALVLDAASG 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: AMIA2_MYCBO (Putative amidase amiA2 OS=Mycobacterium bovis GN=amiA2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 69/185 (37.30%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 179 EDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E L A + R G+ +L G+ IAVKD++D + PT GT+ V P T D V RL+ GA++VGKTN ELG P +G RNP+ L A+G DG GS+R+PAA +VG KP GRI + V + G+LA TVEDA +V A +G Sbjct: 64 ESALADAAAADKRRAAGDTAPLL-GIPIAVKDDVDVAGVPTAFGTQGY--VAPATDDCEVVRRLKAAGAVIVGKTNTCELGQWPFTSGPGFGHTRNPWSRRHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSIRIPAAWTHLVGIKPQRGRISTWPLPEAFNGVTVNGVLARTVEDAALVLDAASG 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAAT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain Newman) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain COL) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAA8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain NCTC 8325) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |