FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAA3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus (strain USA300) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSE14 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 72/262 (27.48%), Postives = 122/262 (46.56%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 K +SS ++T R++ R T +++ FI+ E+ + QA + R GE +L G +A KD T+ G++ L + DA V +L G + +GKTNM E G++ + HYG +NP++ + L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G +A T ED ++ + G P ++ P + + TS+ +++G +F+ Sbjct: 16 KKFSSEELT-RVLLSRIATL-------DPQLNSFISLTEDLAITQAQAADARRAAGENGPLL-GAPLAHKDLFCTQGIRTSCGSRMLDNFK-APYDATVVSKLASAGTVTLGKTNMDEFAMGSANESSHYGAVKNPWNLQCVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSIDEPVPDYSASLN-TSLKGLRIGVPKEYFS 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9313) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 66/202 (32.67%), Postives = 98/202 (48.51%), Query Frame = 2 Query: 227 GEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATS--ISAIKLG 826 GE + L GV +A+KD + TT ++ L P ++ RL GA+L+GKTN+ E G+S +G NP+D S++ C ALG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG V DA + I G P ++ V+ P SA S +S +++G Sbjct: 60 GESLPPLAGVPLAIKDNLCTKGIRTTCSSRMLETFVP-PYESTVTERLWQAGAVLLGKTNLDEFAMGSSTETSAFGATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRDSTCLN---VAVPDYCSALSQPMSGVRIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PROM3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9303) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 66/202 (32.67%), Postives = 98/202 (48.51%), Query Frame = 2 Query: 227 GEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATS--ISAIKLG 826 GE + L GV +A+KD + TT ++ L P ++ RL GA+L+GKTN+ E G+S +G NP+D S++ C ALG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG V DA + I G P ++ V+ P SA S +S +++G Sbjct: 60 GESLPPLAGVPLAIKDNLCTKGIRTTCSSRMLETFVP-PYESTVTERLWQAGAVLLGKTNLDEFAMGSSTETSAFGATSNPWDISRVPGGSSGGSAAAVAAGECMAALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFTTNVADAAELLQVIAGSDPRDSTCLN---VAVPDYCSALSQPMSGVRIG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOMG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 73/243 (30.04%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 101 AERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSAT-SISAIKLG 826 A R + A E+ +P K++ +I E+ L A + R G+ ++ L G+ +A+KD TT +K L P D V +L+ GA++VGK N E G+SG + +G RNP++ I LG D GGS+R PA+ CG VG +PT+GR+ GV+ ++ VG + V D ++ A+ G P +V +P + K T + +KLG Sbjct: 25 ATRAMLARIEAVDP--KVNAYITVTPEEALAAAEAADRRIAAGD-MAPLTGIPVALKDIFVTKGIRTTCASKILDNFVP-PYDGTAVAKLKEAGAVIVGKLNQDEFAMGSSGESSAFGPTRNPWNLECIPGGSSSGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLQAVAGHDPMDSTSVEVPVPDY--AKGLTGDVKGLKLG 261
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BORPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gatA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 2 Query: 47 VLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 + + A + ++ R +A + A + + + ++ F++ + + L QA + G L GV IA KD + TT G+K L DA V RL+ GA+ +GK N E G++ N YG RNP+DP+ + L A G D GGSVR PAALCGV G KPT+G + G++ ++ G LA + D L + ++G Sbjct: 13 IAELRAALAGRQVSARELARSALDAAQAAGD----LNTFLHIDPDLTLAQADAADAALAAGTA-GPLAGVPIAHKDAFVTRGWRTTAGSKMLEGYAS-PFDATVVQRLQAAGAVSLGKLNCDEFAMGSANENSAYGPVRNPWDPNAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGIVAFGSSLDQAGPLAPSSRDLLELLDPMSG 235
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RUTMC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ruthia magnifica subsp. Calyptogena magnifica GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 66/234 (28.21%), Postives = 110/234 (47.01%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H T+++ ++ + D + + + ++ + +S ++ FI +E L QA + + G ++L G+ A KD T+ G++ L V P DA +L +++GKTNM E G+S N YG +NP++ KI L A G D GGS+R PA+LCG+ G KPT+GRI G++ ++ G + T +DA +V + G Sbjct: 2 HTKTIVELAQGFKDKDFSCVELTQYYLNRIDQSD-----LNAFITVTDELALAQAQVADDKIASGNA-NILTGIPYAHKDIFCTKGVKTSAGSRMLDTFVSPY--DATVSQKLNQVNLVMLGKTNMDEFAMGSSNENSFYGAVKNPWNYLKIPGGSSGGSAASVAGGLSCFATGTDTGGSIRQPASLCGITGIKPTYGRISRYGMIAYASSLDQAGPMTKTAQDAAIVLNVMAG 227
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEU2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 73/262 (27.86%), Postives = 121/262 (46.18%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 K +SS ++T R++ R T +++ FI+ E+ + QA + R GE +L G +A KD T+ G+ L + DA V RL G + +GKTNM E G++ + HYG +NP++ + L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G +A T ED ++ + G P ++ P + + TS+ +++G +F+ Sbjct: 16 KKFSSEELT-RVLLSRIATL-------DPQLNSFISLTEDLAITQAQAADARRAAGENGPLL-GAPLAHKDLFCTQGIRTSCGSLMLDNFK-APYDATVVSRLASAGTVTLGKTNMDEFAMGSANESSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSIDEPVPDYSASLN-TSLKGLRIGVPKEYFS 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEE4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas entomophila (strain L48) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 72/270 (26.67%), Postives = 122/270 (45.19%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + ++ + + + ++ +++ +++ FI EE L QA + R GE ++L G IA KD T+ G+K L DA V +L G + +GKTNM E G++ + HYG +NP++ + L P G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA T ED ++ + G +V P +F +A S+ +++G +F Sbjct: 2 HQLTLAEIARGLADKSFSSEELTGALLSRIKQLDP---QLNSFITVTEEQALHQARAADARRAAGETGALL-GAPIAHKDLFCTQGVRTSCGSKMLDNFT-APYDATVVAKLAEAGMVTLGKTNMDEFAMGSANESSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDSKDSTSVEEPVPNFSADLNA-SLQGLRIGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotalea psychrophila GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 68/219 (31.05%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSI 808 FI +EE L QA + + GE + L G+ +++KD + P T G+K L K + P +A V +L+ GA+ +GK M E G++ +GV +NP+ + C ++G D GGS+R PAALCGVVG KPT+GR+ G+ ++ G L TV D +V +I G P+ S +P + L++ + Sbjct: 43 FITVDEEGALAQAKAADKALQNGET-NPLCGIPMSIKDLLAVKDLPMTCGSKMLEKFIAPY--NATIVDKLQGAGAVNLGKVTMDEFAMGSTSETCAFGVPQNPWKEGYVAGGSSGGSAVTVAAQECFFSIGTDTGGSIRQPAALCGVVGMKPTYGRVSRYGLTAFASSLDQAGPLCRTVADTALVMNSICGYDPMDSTSINQEVPDYTASLVEGVKGL 258 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |