FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CELJU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cellvibrio japonicus (strain Ueda107) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 67/228 (29.39%), Postives = 107/228 (46.93%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVV 715 H++T+ + K + D + + + ++ + N + +I + L+QA + R G S L GV IA KD + T+ +K L K + P +A V G +++GKTNM E G+S YG +NP++ + L P A D GGS+R PAALCG+ G KPT+GR+ G++ ++ GIL+ T EDA ++ Sbjct: 2 HQFTIAELVKGLRNKDFSSTEITQHYLDRIARLDNT---YNSYITVTGDVALQQAAAADKRLAAGNT-SALCGVPIAHKDIFCTAGVRTSCASKMLDKFIAPY--NATIVENYLKAGVVMLGKTNMDEFAMGSSNETSWYGPVKNPWNTHCVPGGSSGGSAAAVAAHLAPAATASDTGGSIRQPAALCGLTGIKPTYGRVSRWGMIAFASSLDQAGILSRTAEDAALL 223
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACHD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus halodurans GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 66/205 (32.20%), Postives = 95/205 (46.34%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 F+ NEE A E + E +L G+ I VKD I TT ++ L P DA V +LR A+ +GK NM E G+S N + +NP++ + P LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G P+ S + +P Sbjct: 43 FLALNEEKARAYAKELDAALDRSEARGLLFGIPIGVKDNIVTKNLRTTCSSRILGNFDPIY-DATVVHKLREAQAVTIGKLNMDEFAMGSSTENSAFQKTKNPWNLEYVPGGSSGGSAAAVAAGEVPFTLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRNVEDNAYLLQAISGHDPMDSTSANLDVP 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRSV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus sanguinis (strain SK36) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 64/194 (32.99%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLP 742 FI +EE+ L QA + L K + +++ G+ +AVKD I TT +K L+ +P DA V +L I+VGKTNM E G S N ++ +N +D SK+ ++LG D GGS+R PA+ GVVG KPT+GR+ G++ ++ +G + TV++ + I+G P Sbjct: 43 FITVSEEEALAQA--AALDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKILYNYKPIF-DATSVEKLYGKDMIIVGKTNMDEFAMGGSSENSYFKTTKNAWDSSKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPASFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISGNDP 233
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSYWF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter sp. (strain PRwf-1) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 63/196 (32.14%), Postives = 95/196 (48.47%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 K++ FI +EE + A ++ R G+ SVL G+ +A KD TT G+K LH V P DA V +R GA+ +GK NM E G+ + +YG NP+D S++ P A G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G + +D + + G Sbjct: 40 KVNSFITIDEEGARQAAQQADDRRSAGDN-SVLLGLPMAHKDLFCTKGLLTTSGSKILHNFVSPY--DATIVSNIREAGAVCLGKLNMDEFAMGSDNESSYYGAVHNPWDLSRVPGGSSGGSAAAVAAGFVPFATGSDTGGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGTFGRSAQDCAYLLQPMAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEMY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas mendocina (strain ymp) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 72/270 (26.67%), Postives = 125/270 (46.30%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 H+ T+ + +K + + ++ + + + +++ FI E+ ++QA + R GE ++L G IA KD + T+ G+K L + DA V +L+ G + +GK NM E G++ + HYG +NP+D S++ L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA D ++ A+ G +V P V L A ++ +++G +F Sbjct: 2 HQMTLAEIAKGLEAKQFSAEELSRALLARIAQLDP---QLNSFITVTEDLAIEQAKAADARRAAGENGALL-GAPIAHKDLFCTNGVLTSCGSKILTGFK-APYDATVVEKLKAAGTVTLGKLNMDEFAMGSANESSHYGAVKNPWDTSRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGIKPTYGRVSRWGMIAYASSLDQGGPLARDAFDCALLLGAMAGFDAKDSTSVDQP-VDDYLAALAQPLAGLRIGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NEIG1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 70/249 (28.11%), Postives = 116/249 (46.59%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 ++T+ S I+ +A ++ A+ E NP + + +I +++ L +A + R +G S L GV +A KD + + + +K L + P T A V L G + +G+TNM E G++ N YG A+NP++P + L P ALG D GGS+R PA+ CG+ G KPT+G + G++ + G +A T ED ++ A+ G P + K + Sbjct: 3 QYTLKQAGSLLQSKQISAVELASAYLAAIAEK-NPAL--NGYITIDQDKTLAEARAADERIAQGNA-SALTGVPVAYKDIFCQTGWRSACASKMLDNFIFPYT--ATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSFEREKEDY 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METFK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 66/222 (29.73%), Postives = 109/222 (49.10%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +S +I+ + + ++ + + NP +++ +I N E L QA + R G+ L G+ IA KD + TT G++ L + P DA + R GA+ +GKTNM E G+S ++G +NP+D S++ LC A G D GGS+R PA+LCG+ G KPT+G G++ ++ G +A + ED ++ + G Sbjct: 14 ASKEISSVELTQEYLNRIAQL-NP--EINAYITVNPELSLAQAQAADQRIANGDA-GPLTGIPIAQKDIFCAKGWRTTCGSRMLENFIAPY--DAGIIERFNAAGAVNLGKTNMDEFAMGSSNETSYFGKVQNPWDRSRVPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGLSGLKPTYGLASRYGMIAFASSLDQAGPMAHSAEDMALMMNVMTG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LISIN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Listeria innocua GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 76/237 (32.07%), Postives = 112/237 (47.26%), Query Frame = 2 Query: 80 DITP-RMVAERF--ITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 +ITP +V E F I AV + K+ FI N+E L A E L +P ++L G+ I +KD I TT +K L P DA V +L+ I +GK NM E G+S ++ NP+D S++ +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G + +++ P F Sbjct: 19 EITPFDLVTESFNRIEAVED------KVGSFITLNKETALGVAEE--LGDAGIDPNNMLAGLPIGIKDNIVTKNLRTTAASKILENFDPIY-DATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACF3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 70/222 (31.53%), Postives = 103/222 (46.40%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPL-LKSATSISAIKL 823 F+ NEE LKQA E L +L G+ +AVKD I TT +K L +P DA V +L G I VGK N+ E G+S N + +NP+D +++ ALG D GGS+R+PA+ G VG KPT+GR+ G++ + +G L +V+D ++ +AI G + + P F L I +K+ Sbjct: 43 FLALNEEAALKQAAE--LDQAGIAEDQLLAGIPLAVKDNIVTKGLTTTAASKILENFKPVY-DATVVEKLNAAGVINVGKVNLDEFAMGSSTENSAFKTTKNPWDLTRVPGGSSGGSAAAVAAGDVLGALGSDTGGSIRIPASFTGTVGMKPTYGRVSRWGLIAFGSSFDQIGWLTQSVKDNAILMSAIAGKDDRDMTSANQPVPDFAAGLNDQADIKGMKI 261
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DICDI (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Dictyostelium discoideum GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 68/206 (33.01%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 143 PMKMSFFINNNEEDIL-KQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK-----------------ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDA 706 P ++ FI+ +E L KQ ES RY G LDG+ I VKD + TT G+K L P + D+ V L+ GAI++GKTNM E G+S + H+G NP+ + C ++G D GGS+R P++ CGVVGFKP++G I G++ ++ G+L VEDA Sbjct: 37 PNHLNTFISLQDEKSLGKQIKESQERYDNGTN-KRLDGIPIGVKDNFSSKNFKTTCGSKILENYIP-SFDSTVVKLLKEEGAIIIGKTNMDEFSMGSSSTSGHFGKVINPWSKPNNNNNNDNDNNNNGEVLYVAGGSSGGSAAAVASNYCVASIGSDTGGSIRQPSSYCGVVGFKPSYGLISRFGLVAYASSLDTPGVLTNNVEDA 240 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |