FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ACIC5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 64/194 (32.99%), Postives = 88/194 (45.36%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 + GV +KD + P T +K L RP A V RL GA+LVGK N E G+S N YG +NP ++ + LG D GGS+R PA+ CGVVG PT+GR+ G++ ++ VG A TV DA V I G P + S+P + K + ++LG Sbjct: 69 MGGVPFGIKDVLTVEGMPATASSKILEGYRP-PYTATAVQRLIDAGAVLVGKLNCDEFAMGSSNENSAYGPVKNPRALDRVPGGSSGGSAAAVAANMAVATLGTDTGGSIRQPASFCGVVGVLPTYGRVSRYGLIAFASSLDRVGPFAHTVRDAAEVLGVIAGHDPMDATSSSVPVPDY-TEKLDAGVKGLRLG 260
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: AMID_RHOER (Amidase OS=Rhodococcus erythropolis GN=amdA PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-20 Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 242 VLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 VL G +A+KD + + P G++ + P + DA V RL GA + GK +L S P G RNP+D + A+G D GGS+R+PAA CGVVG KPTFG +P +G P+ T+ +G + TV DA ++ + I G Sbjct: 87 VLTGRRVAIKDNVTVAGVPMMNGSRTVEGFTP-SRDATVVTRLLAAGATVAGKAVCEDLCFSGSSFTPASGPVRNPWDRQREAGGSSGGSAALVANGDVDFAIGGDQGGSIRIPAAFCGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVHDAALMLSVIAG 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAES (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 67/234 (28.63%), Postives = 112/234 (47.86%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 +I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + + L P +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + V+D +V AI+G + + + V F Sbjct: 19 EIKPSDVVKDIYAAIEET-DPTIKS--FLALDKENAIKKAEELDELQAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIY-ESTVMNKLHDENAVLIGKLNMDEFAMGGSTETSYFKKTLNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDANDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAEQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 67/234 (28.63%), Postives = 112/234 (47.86%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 +I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I TT +K L P ++ + +L A+L+GK NM E G S ++ NP+D + + L P +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + V+D +V AI+G + + + V F Sbjct: 19 EIKPSDVVKDIYAAIEET-DPTIKS--FLALDKENAIKKAEELDELQAKDQMDGKLFGIPMGIKDNIITKDVETTCASKMLEGFVPIY-ESTVMNKLHDENAVLIGKLNMDEFAMGGSTETSYFKKTLNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNALVLEAISGVDANDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STACT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus carnosus (strain TM300) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 67/225 (29.78%), Postives = 108/225 (48.00%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S+ + +I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I TT +K L P ++ + +L A+L+GK NM E G S +Y NP+D + + L P +LG D GGS+R PAA CG+VG KPT+GR+ G++ ++ +G L V+D +V I G Sbjct: 12 SEMIKNKEIKPSEVVKDIYDAIEET-DPTIKS--FLALDKENAMKKAEELDELQAKDQMEGKLFGIPMGIKDNIITEGLETTCASKMLEGFVPIY-ESTVMNKLHDENAVLIGKLNMDEFAMGGSTETSYYKKTVNPFDHTAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGIVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLETIVG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOE4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 230 EPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 EP S L GV IA+KD + PTT +K L V P DA +LR G ++GKTN+ E G+S N +G RNP+D ++I P+A+G D GGS+R PAA+ VG KPT+G + G++ ++ G TV D +++ I G P ++ P Sbjct: 68 EPASALAGVPIALKDIFTTTDMPTTCASKILEGWVAPY--DATLTSKLRAAGIPILGKTNLDEFAMGSSTENSAFGPTRNPWDVTRIPGGSGGGSAAALASRQAPLAIGTDTGGSIRQPAAVTATVGTKPTYGTVSRFGLVACASSLDQGGPCGRTVLDTALLHEVIAGHDPRDSTSIDAP 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSESM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas syringae pv. tomato GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 65/233 (27.90%), Postives = 110/233 (47.21%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 +++ FI+ E+ + QA + R GE +L G +A KD T+ G++ L + DA V +L G + +GKTNM E G++ + HYG +NP++ + L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G +A T ED ++ + G P ++ P + + TS+ +++G +F+ Sbjct: 37 QLNSFISLTEDLAITQAQAADARRAAGENGPLL-GAPLAHKDLFCTQGIRTSCGSRMLDNFK-APYDATVVSKLASAGTVTLGKTNMDEFAMGSANESSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSIDEPVPDYSASLN-TSLKGLRIGVPKEYFS 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEPW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain W619) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 74/261 (28.35%), Postives = 123/261 (47.13%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 K++SS ++T ++A + +P +++ FI+ EE L QA + R GE ++L G IA KD + T+ G+K L + DA V +L G + +GKTNM E G++ + HYG +NP++ + L P G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA T ED ++ + G ++ P + +A S+ +++G +F Sbjct: 16 KSFSSEELTGALLARI------QQLDP--QLNSFISVTEELALGQARAADARRAAGETGALL-GAPIAHKDLFCTNGVRTSCGSKMLDNFK-APYDATVVAKLAEAGMVTLGKTNMDEFAMGSANESSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDSTSIDEPVPDYSANLNA-SLQGLRIGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NITEC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas eutropha (strain C91) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.673e-20 Identity = 69/226 (30.53%), Postives = 107/226 (47.35%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S S I+ + F+ ++ + NP + FI +EE L QA + G+ ++L G+ IA KD + + TT G+K L + P DA V + G + +GKTNM E G+S +YG +NP+D + L P A G D GGS+R PAALCG+ G KPT+G + G++ ++ G +A + ED ++ + G Sbjct: 10 SSLLSEKKISSTELTGEFLARIK-ALNPDLNA--FITMDEEKSLDQARTADEMIATGQS-TLLTGIPIAQKDIFCANGWLTTCGSKMLSNFISPY--DATVVKQFDQVGMVNLGKTNMDEFAMGSSNETSYYGPVKNPWDRLAVPGGSSGGSACAVAARLAPAATGTDTGGSIRQPAALCGISGIKPTYGLVSRYGMIAFASSLDQAGPMARSAEDLALLLNVMVG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_AGRRH (Indoleacetamide hydrolase OS=Agrobacterium rhizogenes GN=aux2 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.104e-20 Identity = 62/169 (36.69%), Postives = 82/169 (48.52%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQ 751 L GV + K I + T GT L +P T A +L GA+ NMHEL G + N G RNP++PS I L +G D G SVR+PAALCGVVGF+PT GR P G++P++ T G++A V D +++ I G P Q Sbjct: 66 LAGVPLCFKANIATGRFAATAGTPGLQNHKPKT-PAGVARQLLAAGALPGASGNMHELSFGITSNNFATGAVRNPWNPSLIPGGSSGGVAAAVAGRLMLGGVGTDTGASVRLPAALCGVVGFRPTVGRYPTDGIVPVSPTRDTPGVIAQNVPDVILLDGIICGRPPVNQ 233 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |