FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20 Identity = 65/192 (33.85%), Postives = 92/192 (47.92%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPI-SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F++ + L A GE + S L GV +A+KD PTT G+K L R DA +RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G Sbjct: 44 FLHIGAHEALSAAAAVDTALAAGERLPSALAGVPLALKDVFTTVDMPTTCGSKILEGWRS-PYDATLTLRLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNLDRVPGGSGGGSAAALAAYQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTAMLHQVIAG 234
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_AZOVD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20 Identity = 72/246 (29.27%), Postives = 113/246 (45.93%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 HR T+ ++ ++ + + ++E + + E ++ FI E L+QA + R GE ++L G IA KD T+ +K L + P DA V RL G + +GK NM E G++ + HYG RNP++ + L P A G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA + ED ++ +A+ G P V P Sbjct: 2 HRLTLAQIARGLAAKEFSSVELSEALLARIAELDPG---LNSFITVTAEQALEQARAADARRAAGESGALL-GAPIAHKDLFCTKGVRTSCASKILDDFIAPY--DATVVERLAAAGCVSLGKLNMDEFAMGSASESSHYGPVRNPWNTECVPGGSSGGSAAAVAARLVPAATGSDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARSAEDCALLLSAMAGFDPKDSTCVDQP 241
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNPX (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH8102) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 74/263 (28.14%), Postives = 118/263 (44.87%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 T+ + + +G ++ R + + + + E S P ++ F+ E A GE + L G+ +A+KD + TT ++ L + P ++ RL GA+LVGKTN+ E G S +G +NP++ + C +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ VG A V DA + I G S T +P S L A SI +++G Sbjct: 2 TISAWRQRLQAGGVSSRELVDEHLQRL-EQSEP--SLNAFVEVTAERARADADRVDQARAAGEDLGPLAGLPLAIKDNLCTRGVRTTCSSRMLEQFVP-PYESTVTDRLWGAGAVLVGKTNLDEFAMGGSTETSAFGATKNPWNIEHVPGGSSGGSAAAVASGSCLASLGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQVGPFAGCVADAAELLQVIAGHDQRDSTCLTADVPNYSAGL---AASIKGLRVG 257
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 74/261 (28.35%), Postives = 121/261 (46.36%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 K++SS ++T ++A R P +++ FI+ ++ L QA + R GE VL G IA KD + T+ G+K L + DA V +L G + +GKTNM E G++ + HYG +NP++ + L P G D GGS+R PAAL + G KPT+GR+ G++ ++ G LA T ED ++ + G ++ P + +A S+ +++G +F Sbjct: 16 KSFSSEELTGALLA-------RIKQLDP-QINSFISITDDLALAQARAADARRAAGET-GVLLGAPIAHKDLFCTNGVRTSCGSKMLDNFK-APYDATVVAKLAEAGMVTLGKTNMDEFAMGSANESSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDSTSIEEPVPDYSASLNA-SLQGLRIGLPKEYF 265
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NEIMB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup B GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 70/249 (28.11%), Postives = 117/249 (46.99%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 ++T+ S S I+ +A ++ A+ E NP + + +I +++ L +A + R +G S L GV +A KD + + + +K L + P T A V L G + +G+TNM E G++ N YG A+NP++ + L P ALG D GGS+R PA+ CG+ G KPT+G + G++ + G +A T ED ++ A+ G P ++ K + Sbjct: 3 QYTLKQASVLLQSKQISAVELASAYLAAIAEK-NPAL--NGYITIDQDKTLAEARAADERIAQGNA-SALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYT--ATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDY 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 75/266 (28.20%), Postives = 122/266 (45.86%), Query Frame = 2 Query: 50 LDYSK---AYSSGDITPRMVAERFITAVRESS--NPPMKMSFFINNNEEDILKQATESTLR-YKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPL-LKSATSISAIKLG 826 +DY K A D+ + ++ R +T + ++ F+ NE+ LKQAT+ + +P++ G+ +A+KD I TT +K L P DA +L I VGKTN+ E G S N + +N +D +K+ ALG D GGS+R PAA G+VG KPT+GR+ G++ ++ +G + +V+D + +AI G + + P F L ATS+ +++G Sbjct: 1 MDYFKTDLASLHADLVAKKISARELTQATFDNIKTTDAQVDAFLTLNEDAALKQATKIDEQGVATDQPLA---GIPVALKDNIVTKGLKTTAASKMLANFNPVY-DATVTEKLAQAQMITVGKTNLDEFAMGGSTENSAFKTTKNAWDYTKVPGGSSGGSAAAVASGQVLAALGSDTGGSIRQPAAFNGIVGLKPTYGRVSRWGLIAFGSSLDQIGPMTRSVKDNATMLSAIAGHDEHDLTSSTQPVPDFAADLTDATSVKGMRIG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOSL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter sulfurreducens GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 +++ +I ++ L A + R G ++ L GV +A+KD TT G+K L P D V +LR GA++VGK N E G+SG + +G +NP++ + I LG D GGS+R PA+ CG VG +PT+GR+ GV+ ++ VG + V D ++ A+ G P ++ LP Sbjct: 39 RVNAYITVTPDEALAAAEAADRRIAAGG-LTPLTGVPVALKDIFVTRGIRTTCGSKILGNFIP-PYDGTVVAKLREAGAVIVGKLNQDEFAMGSSGESSAFGATKNPWNLACIPGGSSSGSAAAIAARSATATLGTDTGGSIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLGAVAGHDPLDSTSIDLP 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EXISA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 69/212 (32.55%), Postives = 98/212 (46.23%), Query Frame = 2 Query: 179 EDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKSATSI 808 ED +QA K + + L G+ I VKD I TT + +L P DA V RL GA+ +GK NM E G+S N + RNP+DP+++ +LG D GGS+R PAA CGVVG KPT+G + G++ ++ +G L TVED + I G + S V +P + L + T + Sbjct: 48 EDAFEQAKRMDELAKMSD--NPLFGMPIGVKDNIVTKGMRTTCASTFLENFVPAH-DATVVERLHDAGALTIGKLNMDEFAMGSSNENSAFKPVRNPWDPTRVPGGSSGGSAASVAAGQVLFSLGSDTGGSIRQPAAYCGVVGMKPTYGLVSRFGLVAFASSLDQIGPLTRTVEDNAYLLNTIAGHCDMDSTSAEVEVPDYTAALNQDLTGM 256
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACSU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus subtilis GN=gatA PE=3 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 67/209 (32.06%), Postives = 97/209 (46.41%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 K+ F+ +EE A E +L G+ I VKD I TT +K L P DA V RL+ A+ +GK NM E G+S N Y + +NP++ + P +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G + S V +P Sbjct: 39 KVQAFLALDEERARAYAKELDEAVDGRSEHGLLFGMPIGVKDNIVTKGLRTTCSSKILENFDPIY-DATVVQRLQDAEAVTIGKLNMDEFAMGSSTENSAYKLTKNPWNLDTVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAFLLQAISGVDKMDSTSANVDVP 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: AMI4_MYCTU (Putative amidase amiD OS=Mycobacterium tuberculosis GN=amiD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 68/202 (33.66%), Postives = 92/202 (45.54%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E +P +K F+ E L A + +G VL GV I VKD PT GT RP DA V RLR GA+++GK M E G +P NP+DP+ LC ++G D GGS+R P ++CGV G KPT+GR+ GV+ L + VG + + DA V+ + I G Sbjct: 48 ERLDPQLKSYAFVM--PETALAAARAADADIARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAY-DATVVARLRAAGAVIIGKLAMTE--GAYLGYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGSIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSVIAG 244 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |