FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: AMI4_MYCBO (Putative amidase amiD OS=Mycobacterium bovis GN=amiD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19 Identity = 68/202 (33.66%), Postives = 92/202 (45.54%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E +P +K F+ E L A + +G VL GV I VKD PT GT RP DA V RLR GA+++GK M E G +P NP+DP+ LC ++G D GGS+R P ++CGV G KPT+GR+ GV+ L + VG + + DA V+ + I G Sbjct: 48 ERLDPQLKSYAFVM--PETALAAARAADADIARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAY-DATVVARLRAAGAVIIGKLAMTE--GAYLGYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGSIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSVIAG 244
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_SYNPW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain WH7803) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 63/241 (26.14%), Postives = 111/241 (46.06%), Query Frame = 2 Query: 47 VLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 + ++ + ++G+++ R + + + + E+ P + F+ E A GE + L G+ +A+KD + TT ++ L + P ++ RL GA+L+GKTN+ E G S +G NP++P + C ++G D GGS+R PA+ CGVVG KPT+GRI G++ ++ VG + +V DA + + G P ++ P Sbjct: 3 IAEWRQQLANGEVSARELTDHHLARI-EAVEPGIHA--FLEVTAERARADADRVDEARASGEDLPPLAGIPLAIKDNLCTRGVRTTCSSRMLEQFVP-PYESTVTERLWAAGAVLLGKTNLDEFAMGGSTETSAFGPTANPWNPEHVPGGSSGGSAAAVASGECLASIGSDTGGSIRQPASFCGVVGLKPTYGRISRYGLVAFASSLDQVGPFSHSVADAAELLQVMAGADPRDSTCLNAP 239
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRTD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 67/215 (31.16%), Postives = 102/215 (47.44%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 SK S+ ++T + + I A E+ N F+ EE L QA + K + ++L G+ AVKD I TT +K L+ P DA V + I++GKTNM E G SG +YG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G + TV++ Sbjct: 17 SKEISATELTQATIDD--IKAREEAVNA------FVTVAEEAALAQA--EAIDEKGIDADNLLSGIPFAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKAKDMIVIGKTNMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRT2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 67/215 (31.16%), Postives = 102/215 (47.44%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 SK S+ ++T + + I A E+ N F+ EE L QA + K + ++L G+ AVKD I TT +K L+ P DA V + I++GKTNM E G SG +YG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G + TV++ Sbjct: 17 SKEISATELTQATIDD--IKAREEAVNA------FVTVAEEAALAQA--KAIDEKGIDADNLLSGIPFAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKAKDMIVIGKTNMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRT1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus thermophilus (strain CNRZ 1066) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 67/215 (31.16%), Postives = 102/215 (47.44%), Query Frame = 2 Query: 59 SKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 SK S+ ++T + + I A E+ N F+ EE L QA + K + ++L G+ AVKD I TT +K L+ P DA V + I++GKTNM E G SG +YG +N +D SK+ ++LG D GGS+R PAA G+VG KPT+G + G++ ++ +G + TV++ Sbjct: 17 SKEISATELTQATIDD--IKAREEAVNA------FVTVAEEAALAQA--KAIDEKGIDADNLLSGIPFAVKDNISTDGILTTAASKMLYNYEPIF-DATAVANAKAKDMIVIGKTNMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSQTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOS5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 70/249 (28.11%), Postives = 116/249 (46.59%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY--DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ + A + G+++ + +TA+ ++ P ++ F++ E L QA S R +GE L+G+ + +KD + + L +P ++ +L GA+++GK NM E G+S YG A NP+ D K+T LC A G D GGS+R PAA G+VG KPT+GR+ G++ ++ G + TV DA ++ A+ G P + +P F Sbjct: 7 TIAEARDALAKGELSAVDLTMACLTAI-DAGTP---LNAFVHLTPEIALDQARASDAR--RGEGAGALNGIPLGIKDLFCTRGVASQAASNILKGFKP-EYESTVTSKLFAAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRKLTPGGSSGGSAAAVAADLCLGATGTDTGGSIRQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKTVRDAAILLGAMAGHDPKDSTSADIPVPDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NITSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitratiruptor sp. (strain SB155-2) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 57/162 (35.19%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 248 DGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +GV +A+KD I + T +K L K DA + +LR G G+TNM E G++ YG NP D S++ + ALG D GGS+R PAA CGVVG KPT+GR+ G+ ++ +G + VEDA ++Y I G Sbjct: 43 EGVPVAIKDNIQVDGWEVTCASKIL-KGYIAPYDATVIQKLRANGLAPFGRTNMDEFAMGSTTETSCYGKTLNPKDTSRVPGGSSGGSAAAVAAGIAIAALGSDTGGSIRQPAAFCGVVGMKPTYGRVSRYGLAAYGSSLDQIGPMTQNVEDAAILYNIIAG 203
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCLE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium leprae GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 61/169 (36.09%), Postives = 84/169 (49.70%), Query Frame = 2 Query: 227 GEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 G+ S L GV +A+KD PTT G+K L DA RLR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++A I G Sbjct: 71 GQLSSTLAGVPLALKDVFTTVDMPTTCGSKILQGWHS-PYDATVTTRLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNVDRVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHAVIAG 238
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCGE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma genitalium GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 61/185 (32.97%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 164 INNNEEDILKQATES-TLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVV 715 +N + +LK E + + K + +L+ + +KD I TTGG+ +L P A L + GA+LVGK NM E G G +G +GV +P + S I + P ++ D G S+R PA++C VVGFKPT+G I +GV P ++ VGI A V D +V Sbjct: 32 LNKSSNFLLKNTVEIYSKKINKSDEKILLNNIPYVLKDNIATKDIVTTGGSLFLKNYLP-PFSATVFELLEMNGALLVGKANMDEFGLGGTGSYSAFGVVHHPENSSLIAGGSSSGSAYAVAKDIVPFSIATDTGDSIRRPASICNVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDIAIV 215
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EHRCR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia chaffeensis (strain Arkansas) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 69/217 (31.80%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYK-KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVS 778 K++ FI E L A ++ + + E ++ L G+ + +KD TT + L P D+ RL GA+++GK NM E G+S N +G +NP+ + + LC ALG D GGSVR PAALCG+VG KPT+GR G++ ++ G+L TVEDA ++ +I G S +++PK S Sbjct: 38 KLNAFITKTPEIALSAAEKADYIFTHQKENLTPLTGIPVGIKDLFCTKHVRTTACSNILKNFTP-QYDSTVTKRLLDNGAVMLGKLNMDEFAMGSSNSNSCFGHVKNPWVRADGVEVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAALCGIVGLKPTYGRCSRFGMIAFASSLDQAGVLTRTVEDASLMLQSICGYDIQDSTSANIAVPKFS 253 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |