FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMJR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter jejuni (strain RM1221) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 248 DGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +GV +A+KD I + T +K L + P DA ++ L+ G G+ NM E G+S + +YG NP + ++ L +LG D GGSVR PAA CG VGFKP++GR+ G+ + ++ +G+L VEDA ++Y AI G Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPY--DASVIVNLKANGFSPFGRCNMDEFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAG 209
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMJ8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 248 DGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +GV +A+KD I + T +K L + P DA ++ L+ G G+ NM E G+S + +YG NP + ++ L +LG D GGSVR PAA CG VGFKP++GR+ G+ + ++ +G+L VEDA ++Y AI G Sbjct: 49 EGVPVAIKDNISVKGWELTSASKILQGYIAPY--DASVIVNLKANGFSPFGRCNMDEFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAG 209
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NITMU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=gatA PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 66/213 (30.99%), Postives = 100/213 (46.95%), Query Frame = 2 Query: 95 MVAERFITAVRESS---------NPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 M+A R I++V +S NP ++ QA + + +G+P++ GV IA KD + TT G+K L + P DA + R GA+ +GKTNM E G+S YG +NP+D + + + P A G D GGS+R PAALCG+ G KPT+G + G++ ++ G +A + ED Sbjct: 12 MLAARKISSVELTSEFLKRSRALNPEYNAFITLDERTSLAQAQAADILIGSGRGQPLT---GVPIAQKDIFCTKGWLTTCGSKMLSNFISPY--DAHVIGRFNAVGAVNIGKTNMDEFAMGSSNETSFYGPVKNPWDTAAVPGGSSGGSACAVAARMAPAATGTDTGGSIRQPAALCGISGLKPTYGLVSRYGMIAFASSLDQGGPMAKSAED 219
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NEIM0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup C (strain 053442) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 67/248 (27.02%), Postives = 115/248 (46.37%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 ++T+ S S I+ +A ++ A+ E NP + + +I +++ L +A + R +G S L G+ +A KD + + + +K L + A V L G + +G+TNM E G++ N YG +NP++P + L P ALG D GGS+R PA+ CG+ G KPT+G + G++ + G +A T ED ++ A+ G P ++ K + Sbjct: 3 QYTLKQASVLLQSKQISAVELASAYLAAIAEK-NPAL--NGYITIDQDKTLAEARAADERIAQGNA-SALTGIPVAYKDIFCQTGWRSACASKMLDNFIS-SYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDY 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LISMF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 K+ FI N+E A E L +P ++L G+ I +KD I TT +K L P DA V +L+ I +GK NM E G+S ++ NP+D S++ +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G + +++ P F Sbjct: 39 KVGSFITLNKEAAFGVAEE--LGDAGIDPNNMLSGLPIGIKDNIVTKNLRTTAASKILENFDPIY-DATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LISMC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 K+ FI N+E A E L +P ++L G+ I +KD I TT +K L P DA V +L+ I +GK NM E G+S ++ NP+D S++ +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G + +++ P F Sbjct: 39 KVGSFITLNKEAAFGVAEE--LGDAGIDPNNMLSGLPIGIKDNIVTKNLRTTAASKILENFDPIY-DATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_HALOH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 71/256 (27.73%), Postives = 115/256 (44.92%), Query Frame = 2 Query: 80 DITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 +++P V + F + E + K+ ++ ++ A S K G L G+ +A+KD I TT +K L+ +P DA V RL+ G I +GKTNM E G+S N + NP++ P ALG D GGS+R PAA CGVVG KPT+G + G++ ++ +G + V D+ ++ I+G P +V K + + +K+G + +F+ Sbjct: 19 EVSPEEVLDSFYKRIDEVED---KVKAYVTLTRDE----ARNSLASLKDGR----LAGIPLAIKDNISTRGIKTTCSSKILNNYKP-PYDATVVKRLKEEGGITLGKTNMDEFAMGSSTENSGFYPTHNPWNLDHAPGGSSGGSAAAVAAGEAPGALGSDTGGSIRQPAAFCGVVGLKPTYGCVSRYGLVAFASSLDQIGPITKDVTDSALLLNVISGHDPMDSTSVDREKEDYTTYLK-DDVKGMKIGLPEEYFS 261
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMLR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 248 DGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 DGV +A+KD I + T +K L V P DA + LR G+ NM E G++ YG NP+D +K+ L +LG D GGSVR PAA CG VGFKP++GR+ G+ + ++ +G+L V+DA ++Y I G Sbjct: 49 DGVPVAIKDNISVKDWELTCASKILQGYVAPY--DASVITNLRKNNLSPFGRCNMDEFAMGSTSATSFYGKTLNPHDNTKVPGGSSGGSAAAVASGLAIASLGSDTGGSVRQPAAFCGCVGFKPSYGRVSRYGLAAYSSSLDQIGVLTQNVKDAAILYDVIAG 209
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 62/194 (31.96%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + E L QA + KGE L G+ IA KD + +T G+K L DA V RL G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDAELTLAQAKAADAALAKGEA-GPLAGLPIAHKDVFVTRGWRSTAGSKMLANYAS-PFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURCM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A++G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GALTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSG 228 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |