FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURA4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia ambifaria (strain MC40-6) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19 Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A++G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GALTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMSG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN2_AGRVI (Indoleacetamide hydrolase OS=Agrobacterium vitis GN=TA-iaaH PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 64/185 (34.59%), Postives = 86/185 (46.49%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING------PLPSQQPTVSLPKVSF 781 L G+ + K I +PTT T L P RL GA+ NMHEL G + N G RNP++PS I L +G D G SVR+PAALCGVVGF+PT GR P ++P++ T GI+A V D +++ I+G P+P + + LP F Sbjct: 66 LRGIPLCFKANIATGIFPTTAATPALINHLPKIPSRIAE-RLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPSLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYPRDRIIPVSPTRDTAGIIAQCVADVVILDQVISGRPARILPIPLKGLRIGLPTTYF 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STAAU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 69/233 (29.61%), Postives = 109/233 (46.78%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 I P V + A+ E+ +P +K F+ ++E+ +K+A E K + L G+ + +KD I + TT +K L P ++ + +L A+L+GK NM E G S NP+D + L P +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G L V+D +V AI+G + + + V F Sbjct: 20 IKPSDVVKDIYDAIEET-DPTIKS--FLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIY-ESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSISKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADANDSTSAPVDDVDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_NITEU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas europaea GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 70/222 (31.53%), Postives = 104/222 (46.85%), Query Frame = 2 Query: 71 SSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S I+ + F++ ++ + NP + FI +EE L QA + G + L G+ IA KD + TT G+K L V P DA V R G + +GKTNM E G+S +YG +NP+D + L P A G D GGS+R PAALCG+ G KPT+G + G++ ++ G +A + ED ++ + G Sbjct: 14 SEKKISSTELTSEFLSRIK-ALNPDLNA--FITIDEEKSLDQANVADKMIAAGRS-TPLTGIPIAQKDIFCARGWLTTCGSKMLSNFVSPY--DATVVERFDQAGMVNLGKTNMDEFAMGSSNETSYYGPVKNPWDRLAVPGGSSGGSACAVAARLAPAATGSDTGGSIRQPAALCGISGIKPTYGLVSRYGMIAFASSLDQGGPMAKSAEDLALLLNTMVG 229
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LISW6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 K+ FI N+E A E L +P ++L G+ I +KD I TT +K L P DA V +L+ I +GK NM E G+S ++ NP+D S++ +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G + +++ P F Sbjct: 39 KVGSFITLNKEAAFDVAEE--LGDAGIDPNNMLAGLPIGIKDNIVTKNLRTTAASKILENFDPIY-DATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LISMH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 K+ FI N+E A E L +P ++L G+ I +KD I TT +K L P DA V +L+ I +GK NM E G+S ++ NP+D S++ +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G + +++ P F Sbjct: 39 KVGSFITLNKEAAFGVAEE--LGDAGIDPNNMLAGLPIGIKDNIVTKSLRTTAASKILENFDPIY-DATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_HALMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Haloarcula marismortui GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 62/176 (35.23%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK 772 L G +AVKD I TT G+ L P DA V RL+ GA + GKTNM E G GT+ +G NP ++ +ALG D GGS+R PAA CGVVG KPT+G + G++ ++ +G +A +VE A + I GP T P+ Sbjct: 21 LAGKTVAVKDNISTEGVRTTCGSAMLEDYVP-PYDATVVERLKDAGATIPGKTNMDEFGMGTTTETSAFGAVENPAAEGRVPGGSSGGSAAVVAAGDADLALGSDTGGSIRCPAAFCGVVGIKPTYGLVSRYGLIAYANSLEQIGPIAPSVEGAAELLDVIAGPDEHDATTQEAPE 195
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURVG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19 Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L GV IA KD + +T G+K L + DA V RL+ G + +GKTNM E G+S N +G +NP+D + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GPLTGVPIAHKDVFVTRGWRSTAGSKMLENYQS-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTHAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRMU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus mutans GN=gatA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19 Identity = 61/191 (31.94%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 FI +E+ L QA + + K + +V+ G+ +AVKD I TT +K L+ +P DA V +L I+VGKTNM E G S N ++ + +N ++ K+ ++LG D GGS+R PAA GVVG KPT+GR+ G++ ++ +G + TV++ + I+G Sbjct: 43 FITVTQEEALAQA--AAIDEKGIDADNVMSGIPLAVKDNISTKNILTTAASKMLYNYKPIF-DATSVEKLYGRDMIIVGKTNMDEFAMGGSTENSYFKLTKNAWNQEKVAGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGIKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LISMO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Listeria monocytogenes GN=gatA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19 Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 K+ FI N+E A E L +P ++L G+ I +KD I TT +K L P DA V +L+ I +GK NM E G+S ++ NP+D S++ +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + VED + AI+G + +++ P F Sbjct: 39 KVGSFITLNKEAAFGVAEE--LGDAGIDPNNMLAGLPIGIKDNIVTKNLRTTAASKILENFDPIY-DATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAVAAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNVEDNAYLLEAISGLDANDSTSINQPVERF 246 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |