FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 60/194 (30.93%), Postives = 92/194 (47.42%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ E L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVEPELTLAQAKAADAELARGAG-GPLTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 59/194 (30.41%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GALTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain HI2424) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 59/194 (30.41%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GALTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURCC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain MC0-3) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 59/194 (30.41%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GALTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia cenocepacia (strain AU 1054) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 59/194 (30.41%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + + L QA + +G L G+ IA KD + +T G+K L DA V RL+ G + +GKTNM E G+S N +G +NP+D + + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDADLTLAQAKAADAELARGAG-GALTGLPIAHKDVFVTRGWRSTAGSKMLANYES-PFDATVVARLQAAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMAQSASDCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ANAPZ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaplasma phagocytophilum (strain HZ) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNP----YDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++L+ + +P + E +I + + ++ F+ ++ L+QA + +GE IS L G+ I VKD + TT + L P + ++ L A ++GK NM E G++ +G +NP Y I LC A+G D GGSVR PAALCG+VG KPT+GR G++ ++ G+L TVEDA ++ A+ G Sbjct: 9 SILEAHNCLKRKEFSPTELVEAYIDEMENEN-----LNAFVTKTQDIALEQARKVENLLLQGEKISPLAGMPIGVKDLFCTAGVRTTACSDILKNFVP-SYESTISQNLWNNNACMMGKLNMDEFAMGSASSYSCFGPVKNPWKGPYGEDLIPGGSSGGSSAAVAGRLCIAAIGSDTGGSVRQPAALCGIVGAKPTYGRCSRWGMIAFASSLDQAGVLTRTVEDAAIMLQAMCG 236
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma pneumoniae GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 59/178 (33.15%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 185 ILKQATE-STLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVV 715 +LK E + + K S L+ + +KD I TTGG+++L P A L GA+LVGK N+ E G G +G++ +G +P++ + I + P ++G D G SVR PA++C +VGFKPT+G I +GV P ++ VGI A V D +V Sbjct: 39 LLKNTVEWAQAQAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSRFLEDYIP-PFSATVFELLNNSGALLVGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDSVRRPASICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFARYVYDVALV 215
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACSS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 56/165 (33.94%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 239 SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++L G+ I +KD + TT +K L +P DA V +L+ AI++GKTN+ E G+S + +NP+D K+ ALG D GGS+R PAA G+VG KPT+GR+ G + ++ VG+ + TV D V AI+G Sbjct: 67 NLLAGMPIGIKDNLLTDGVTTTAASKMLANFKPVF-DATVVEKLKAKKAIMIGKTNLDEFAMGSSTETSAFKKTKNPWDLDKVPGGSSGGSAAAVAAGEVVAALGTDTGGSIRQPAAFNGIVGIKPTYGRVSRWGAIAFASSLDQVGVFSRTVADNATVLQAISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EHRRG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia ruminantium (strain Gardel) GN=gatA PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 64/200 (32.00%), Postives = 96/200 (48.00%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATEST-LRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +++ FI E L A ++ + + + I+ L G+ + +KD TT + L P D+ V RL GA+++GK NM E G+S N +G NP+ + + LC ALG D GGSVR PAA CG+VG KPT+GR SG++ ++ G+L TV+DA ++ I G Sbjct: 38 QLNAFITKTPEVALNAARKADHILTHEQDKITSLTGIPVGIKDLFCTKNIKTTACSNILRNFTP-QYDSTVVKRLIDDGAVMLGKLNMDEFAMGSSNSNSCFGPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRSGMIAFASSLDQAGVLTRTVKDAALMLQPICG 236
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMFF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 61/177 (34.46%), Postives = 87/177 (49.15%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVS 778 GV IA+KD I + T +K L V P A V +L G G+TNM E G++ + YG NP D +++ L ALG D GGS+R PAA CG VGFKPT+GR+ G+ + ++ +G + +VEDA ++Y I G P + +L +S Sbjct: 50 GVPIAIKDNIQVKNWSITSCSKILQGYVAPY--HATVVEKLLKAGLAPFGRTNMDEFAMGSTTESSFYGKTLNPLDHTRVPGGSSGGSAAAVSAGLAIAALGSDTGGSIRQPAAFCGCVGFKPTYGRVSRYGLGAYSSSLDQIGPITRSVEDAALLYDIIAGHDPKDSTSSNLENIS 224 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |