FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMC5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter curvus (strain 525.92) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 2 Query: 227 GEPISVL-DGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 G P+S L +GV IA+KD I + T G+K L + P +A + +L G+TNM E G++ + YG NP + + + + ALG D GGS+R PAA CG VGFKPT+GR+ G+ + ++ +G +A VEDA ++Y I G Sbjct: 41 GLPLSKLGEGVPIAIKDNIQIKGWSVTSGSKILQGYIAPY--NATAIEKLLARNLAAFGRTNMDEFAMGSTTESSFYGHTLNPLNHAHVPGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPAAFCGCVGFKPTYGRVSRYGLAAYSSSLDQIGPIAQNVEDAAILYDIIAG 209
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ZYMMO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Zymomonas mobilis GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 73/265 (27.55%), Postives = 119/265 (44.91%), Query Frame = 2 Query: 47 VLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY-----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 V D + GD + + VAE F+TA E+ K++ FI + LKQA ++ G+ + L GV + +KD + Y TT +K + P ++ +L GA +VGK N+ + G+S +G +P+ D + L P A G D GGS+R PA+ G+ G KPT+GR GV+ ++ G +A +V+D + + G P +V + ++ L S + I K+G Sbjct: 9 VTDLRDGIAKGDFSAKEVAESFLTATNEAE----KLNAFITLTPDHALKQAEKADKDRASGQ-LKPLSGVPLGIKDLFCTNGYRTTAASKIIDNFVP-PYESTITEKLFSAGAGMVGKLNLDQFAMGSSNETSAFGNVISPWRQKGDDTALTPGGSSGGSAAAVAAKLVPAATGTDTGGSIRQPASFTGITGLKPTYGRCSRYGVIAFASSLDQAGPMAHSVKDCAALLEVMAGFDPKDSTSVDVMVPNWEKLLS-SDIRGKKIG 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PSEF5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 69/236 (29.24%), Postives = 111/236 (47.03%), Query Frame = 2 Query: 62 KAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 K +SS ++T ++A R + P +++ FI+ ++ L QA + R GE ++L G IA KD T+ G+K L + DA V +L GA+ +GKTNM E G++ + YG +NP++ + L P A D GGS+R PAA + G KPT+GR+ G++ ++ G LA T ED ++ + G P+ ++ P Sbjct: 16 KKFSSVELTQTLLA-------RIAQLDP-QINSFISLTQDLALSQAKAADERRANGESGALL-GAPIAHKDLFCTQGIRTSCGSKMLDNFK-APYDATVVAKLAAAGAVTLGKTNMDEFAMGSANESSWYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPAATATDTGGSIRQPAAFTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCAILLQGMAGFDPNDSTSIDEP 241
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_PELPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter propionicus (strain DSM 2379) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 66/207 (31.88%), Postives = 95/207 (45.89%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 +++ FI E L +A + R GE VL G+ +AVKD TT G++ L+ P A +L+ G +L+GK N E G+S + G RNP++ I V LG D GGS+R PA+ CG VG KPT+GR+ GV+ ++ VG L V D ++ A+ G P +V P Sbjct: 39 RINAFITVTPERALAEAEAADRRIAAGEA-DVLTGIPLAVKDIFLTEGTLTTCGSRILNNFIP-PYSATSFEKLKQRGMVLLGKLNQDEFAMGSSNESSASGPCRNPWNTDCIPGGSSGGSAAAIAARQATVTLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPLTRDVTDCAIMLGALAGHDPKDSTSVDRP 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACCB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus casei (strain BL23) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 61/179 (34.08%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 L GV IA+KD I TT +K L P DA + +L GAI VGKTNM E G+S N + +N +D +++ ALG D GGS+R PAA G+VG KPT+GR+ G++ + ++ +G L V+DA + I G T P F Sbjct: 69 LAGVPIAIKDNIVTKGVVTTAASKMLANFNPIY-DATVMQKLDAAGAINVGKTNMDEFAMGSSTENSAFKTTKNAWDHTRVPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPAAFNGIVGVKPTYGRVSRWGLIAFSSSLDQIGTLTRHVKDAAQLLNVIAGHDERDSTTADTPVPDF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACC3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus casei (strain ATCC 334) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 61/179 (34.08%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 L GV IA+KD I TT +K L P DA + +L GAI VGKTNM E G+S N + +N +D +++ ALG D GGS+R PAA G+VG KPT+GR+ G++ + ++ +G L V+DA + I G T P F Sbjct: 69 LAGVPIAIKDNIVTKGVVTTAASKILANFNPIY-DATVIQKLDAAGAINVGKTNMDEFAMGSSTENSAFKTTKNAWDHTRVPGGSSGGSAAAVAAGEVIAALGSDTGGSIRQPAAFNGIVGVKPTYGRVSRWGLIAFSSSLDQIGTLTRHVKDAAQLLNVIAGHDERDSTTADTPVPDF 246
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DESRM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotomaculum reducens (strain MI-1) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 64/226 (28.32%), Postives = 102/226 (45.13%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 K+ ++ E +A + + GE I L G+ IA+KD + TT +K L+ P A V ++ ++VGKTNM E G+S N + + NP+D ++ ++LG D GGS+R PAALCGVVG KPT+G + G++ ++ +G V D V I G P + +L + + + I +K+G Sbjct: 39 KVKSYLTLTREQAEIKARQVDQKIAAGESIGPLAGIPIAIKDNMCTQGIRTTCASKILYNFVP-PYSATSVEKVYTADMVMVGKTNMDEFAMGSSTENSGFHLTHNPWDLDRVPGGSSGGSAAAVAAGEAIISLGSDTGGSIRQPAALCGVVGMKPTYGSVSRYGLVAYASSLDQIGPFTRDVTDMAHVLNVICGHDPMDSTSANLKQTDYTQFLT-NDIKGMKIG 262
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CORDI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium diphtheriae GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 69/222 (31.08%), Postives = 102/222 (45.95%), Query Frame = 2 Query: 74 SGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGE-PISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S ++T R V + + + + + F++ E+ L A KGE P S L GV +A+KD + PTT +K L V P DA ++R G ++GKTNM E G+S N YG NP+D + P+ +G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G Sbjct: 25 SREVTSREVTQAHLDRINDVDGT---LHAFLHVGVEEALAAADAVDESLDKGEAPASALAGVPLALKDVFVTTDAPTTCASKMLEGYVAPY--DATVTKKIREAGIPILGKTNMDEFAMGSSTENSAYGPTLNPWDIERTPGGSGGGTSAALASGEAPLGIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQGGPTARTVLDTALLHEVIAG 241
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMC1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter concisus (strain 13826) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 60/178 (33.71%), Postives = 87/178 (48.88%), Query Frame = 2 Query: 248 DGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVS 778 +GV IA+KD I + T +K L V P +A + +L G+TNM E G++ + YG NP + + + L ALG D GGS+R PAA CG VG KPT+GR+ G+ + ++ +G +A VEDA ++Y AI G P + +P VS Sbjct: 49 EGVPIAIKDNIQVKGWSVTSASKILQGYVAPY--NATVIEKLLSKNLAPFGRTNMDEFAMGSTTESSFYGKTLNPLNHAHVPGGSSGGSAAAVAAGLAVAALGSDTGGSIRQPAAFCGCVGLKPTYGRVSRYGLGAYSSSLDQIGPIAQNVEDAAILYDAIAGHDPKDSTSADVPFVS 224
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 64/209 (30.62%), Postives = 96/209 (45.93%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 K+ F+ +EE A E + +L G+ I +KD I TT +K L P DA V RL A+ +GK NM E G+S N + +NP++ + P +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + +VED + AI+G + S V +P Sbjct: 39 KVQAFLQLDEEKARAYAKELDEALDTRDEHGLLFGMPIGIKDNIVTKDLRTTCASKILENFDPIY-DATVVERLHEAEAVTIGKLNMDEFAMGSSTENSGFKKTKNPWNLETVPGGSSGGSAAAVAAGEVPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRSVEDNAYLLQAISGVDKMDSTSANVDVP 246 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |