FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MORCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moraxella catarrhalis GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 70/276 (25.36%), Postives = 122/276 (44.20%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF--PLLKSATS---ISAIKLGKYDAWF 844 H +V + + + + + E F + +++ FI + ++ L QA + KG+ +L GV +A KD + TT G+K L+ V P DA V + G + +GK NM E G+ + ++G NP+D ++ PVA G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G + D + A + G P +++ P + +L + T ++ K+G A+F Sbjct: 5 HHLSVHELADGLKNKQFSSHELVEHFANRINRLDG---QINSFITKDFDNALAQAKLADKLRAKGDNRPLL-GVPMAHKDNLCTKGVLTTAGSKMLYNFVSPY--DATVVDSIANSGFVSLGKLNMDEFAMGSDNESSYFGAVHNPWDVQRVPGGSSGGSAAAVAAGFVPVATGSDTGGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTFGKSALDCAYLLAPMAGYDPKDATSINRPSEDYVADILATKTDGKPLAGKKIGVAKAYF 274
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METJA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanocaldococcus jannaschii GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 56/164 (34.15%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 L G +I VK I+ Y + +K L + P DA + +++ G +++G NM E G+SG ++G +NP +I LC +ALG D GGS+R PA+ CGVVGFKP++G + G+ L + +G L T EDAL++ I G Sbjct: 49 LYGKIIVVKANINVEGYTISCASKTLENYIAPY--DATVIEKIKENGGLIIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGPLTKTAEDALLLTNIIKG 210
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_GEOLS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 65/204 (31.86%), Postives = 92/204 (45.10%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP 769 FI +E L A + R G + L G+ +A+KD TT +K L + P DA R++ GA+L+GK N E G+S N +G RNP++ I LG D GGS+R PA+ CG VG KPT+GR+ GV+ ++ VG + V DA ++ I G P +V P Sbjct: 43 FITVTKEQALLDAAAADQRIAAGN-CAPLTGIPVALKDIFLTEGVRTTSASKMLDNFIAPY--DATAWTRMKSQGAVLLGKLNQDEFAMGSSCENSAFGPTRNPWNKDHIPGGSSGGSAAAIAAQQAVATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPMTRDVTDAALLLGVIAGYDPKDSTSVDCP 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei (strain SAVP1) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + E L QA + GE L G+ I KD + +T G+K L DA V RL G + +GKTNM E G+S N +G +NP+D S + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDAELTLAQAKAADAALANGEA-GPLAGLPIVHKDVFVTRGWRSTAGSKMLANYAS-PFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + E L QA + GE L G+ I KD + +T G+K L DA V RL G + +GKTNM E G+S N +G +NP+D S + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDAELTLAQAKAADAALANGEA-GPLAGLPIVHKDVFVTRGWRSTAGSKMLANYAS-PFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURM9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei (strain NCTC 10229) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + E L QA + GE L G+ I KD + +T G+K L DA V RL G + +GKTNM E G+S N +G +NP+D S + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDAELTLAQAKAADAALANGEA-GPLAGLPIVHKDVFVTRGWRSTAGSKMLANYAS-PFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURM7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia mallei (strain NCTC 10247) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 152 MSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 ++ F++ + E L QA + GE L G+ I KD + +T G+K L DA V RL G + +GKTNM E G+S N +G +NP+D S + L P A G D GGS+R PA+ GV G KPT+GR+ G++ ++ G +A + D ++ A+ G Sbjct: 37 LNAFVHVDAELTLAQAKAADAALANGEA-GPLAGLPIVHKDVFVTRGWRSTAGSKMLANYAS-PFDATVVARLSAAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCALLLNAMAG 228
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: DUR1_YEAST (Urea amidolyase OS=Saccharomyces cerevisiae GN=DUR1,2 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 8.813e-19 Identity = 77/269 (28.62%), Postives = 123/269 (45.72%), Query Frame = 2 Query: 41 WTVLDYSKAYSSGDITPRMVAERFITAVRESSN-PPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWF 844 W++ D+ + S + R + ++ +S N P+ ++ ++E++L Q L+ ++ + L GV IAVKD ID PTT + D+ V LR GAI+VGKTN+ + G G YG + ++ + P+ALG D GS R+PAAL ++G KPT G GV+P ++ V I A + DA + + P P S P VS PL K +++++ I + K W+ Sbjct: 15 WSIQDWIDFHKSSSSQASL---RLLESLLDSQNVAPVDNAWISLISKENLLHQF--QILKSRENKETLPLYGVPIAVKDNIDVRGLPTTAACPSF--AYEPSKDSKVVELLRNAGAIIVGKTNLDQFATGLVGTRSPYGKTPCAFSKEHVSGGSSAGSASVVARGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGVFSCQGVVPACKSLDCVSIFALNLSDAERCFRIMCQPDPDND-EYSRPYVSNPLKKFSSNVT-IAIPKNIPWY 274
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STREM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18 Identity = 63/191 (32.98%), Postives = 91/191 (47.64%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 FI EE LKQA + L K +P +V+ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D S++ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV + + I G Sbjct: 43 FITIAEEAALKQA--AALDAKGIDPDNVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATAVANAYDKDMIIIGKTNMDEFAMGGSTETSYFKKTKNAWDRSRVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGAVSRYGLIAFGSSLDQIGPFAPTVRENAQLLTVIAG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium paratuberculosis GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18 Identity = 59/165 (35.76%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 239 SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S L GV +A+KD PTT G+K L R DA +LR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G Sbjct: 71 SPLAGVPLALKDVFTTVDMPTTCGSKILQGWRS-PYDATVTTKLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNVERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAG 234 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |