FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium avium (strain 104) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18 Identity = 59/165 (35.76%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 239 SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S L GV +A+KD PTT G+K L R DA +LR G ++GKTNM E G+S N YG RNP++ ++ P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G Sbjct: 71 SPLAGVPLALKDVFTTVDMPTTCGSKILQGWRS-PYDATVTTKLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNVERVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLVACASSLDQGGPCARTVLDTALLHQVIAG 234
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MAGSM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Magnetococcus sp. (strain MC-1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18 Identity = 60/230 (26.09%), Postives = 103/230 (44.78%), Query Frame = 2 Query: 137 NPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLG 826 NP + ++ + QA ++ + G P++ G+ IA KD + + TT ++ L P DA LR GA+++GKTN+ E G+S ++G +RNP+D + + A G D GGS+R PA+L + G KPT+GR G++ ++ G + T EDA ++ + P ++ P F + + +K+G Sbjct: 37 NPTINAFVTVDAEKALAAAQAADARIAAGNGAPLT---GIPIAHKDIFNTTDMRTTCSSRMLENFIP-PFDATITTHLRQAGAVILGKTNLDEFAMGSSTETSYFGASRNPWDTQRTPGGSSGGSSAAIAANMAICATGTDTGGSIRQPASLTNLTGLKPTYGRCSRYGIIAFASSLDQAGPMTRTAEDAAMLLNVMVSYDPKDSTSIQSPAPDFTQALTG-DVKGLKIG 261
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ENTFA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Enterococcus faecalis GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 65/221 (29.41%), Postives = 105/221 (47.51%), Query Frame = 2 Query: 74 SGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLR-YKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 S +IT + E + ++++ ++ FI +EE + A L+ + P++ G+ I +KD I TT G+K LH P DA + ++ I VGK NM E G S ++ +N +D +K+ PV+LG D GGS+R PAA G+VG KPT+GR+ G++ ++ +G L V+D + AI+G Sbjct: 18 SKEITAVDLTEETLNRIQDTEE---QLGSFITVSEEKAMALAKAIDLKGITESNPLA---GIPIGIKDNIVTKDILTTAGSKMLHNFDPIY-DATVMDKVYQADMIPVGKLNMDEFAMGGSTETSYFKKTKNAWDQTKVPGGSSGGSASAVAAGQVPVSLGSDTGGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EHRCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia canis (strain Jake) GN=gatA PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 67/218 (30.73%), Postives = 104/218 (47.71%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRYK-KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPT---VSLPKVS 778 K++ F+ E L A ++ + + E ++ L G+ + +KD TT + L P D+ L GA+++GK NM E G+S N +G +NP+ + LC ALG D GGSVR PAA CG+VG KPT+GR G++ ++ G+L TVED+ ++ +I G +Q PT +++PK S Sbjct: 38 KLNAFVTKTPEIALSAAEKADHIFTHQQENLTPLTGIPVGIKDLFCTKNVRTTACSNILKNFIP-QYDSTVTKLLLNNGAVMLGKLNMDEFAMGSSNSNSCFGNVKNPWIRADGAEVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVEDSALMLQSICG-YDTQDPTSVNINVPKFS 253
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_CAMHC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 55/162 (33.95%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 G+ IA+KD I + T + L V P DA + +LR G G+TNM E G++ + YG NP D S++ + ALG D GGS+R PAA CG VGFKPT+GR+ G+ + ++ +G + V DA +++ I G Sbjct: 50 GIPIAIKDNIQVKNWSVTSASNILQGYVAPY--DATVITKLRSAGFAPFGRTNMDEFAMGSTTESSFYGKTLNPTDYSRVPGGSSGGSAAAVAAGIAVAALGSDTGGSIRQPAAFCGCVGFKPTYGRVSRYGLAAYSSSLDQIGPITQNVTDAAILFDVIAG 209
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACCZ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain ZK / E33L) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACCQ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain Q1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACCN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 63/191 (32.98%), Postives = 90/191 (47.12%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ NEE+ +A E + E +L G+ I VKD I TT +K L P DA V +L I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLNEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTKGLRTTCASKMLANFDPIY-DATVVQKLNEADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLEYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACC7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain AH187) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACC4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain B4264) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |