FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACC2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain G9842) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACC1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain ATCC 10987) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKMLANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOS4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.963e-18 Identity = 67/249 (26.91%), Postives = 115/249 (46.18%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY--DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ D A + G+++ + +TA+ ++ P ++ F++ E L QA + R +G L+G+ + +KD + + L +P ++ +L GA+++GK NM E G+S YG A NP+ D ++T LC A G D GGS+R PAA G+VG KPT+GR+ G++ ++ G + +V DA ++ A+ G P + +P F Sbjct: 7 TIADARDALAKGELSAVDLTMACLTAI-DAGTP---LNAFVHATPEIALDQARAADAR--RGAGAGALNGIPLGIKDLFCTRGVASQAASNILKGFKP-EYESTVTSKLFEAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDSTSADIPVPDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MYCVP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.963e-18 Identity = 60/175 (34.29%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 239 SVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVS 763 S L GV +A+KD + PTT G+K L DA +LR G ++GKTNM E G+S N YG RNP++ + P+A+G D GGS+R PAAL VG KPT+G + G++ ++ G A TV D +++ I G P +V+ Sbjct: 75 SPLAGVPLALKDVFTTTDMPTTCGSKILEGWTS-PYDATVTAKLRAAGIPILGKTNMDEFAMGSSTENSAYGPTRNPWNVDCVPGGSGGGSAAALAAFQAPLAIGSDTGGSIRQPAALTATVGVKPTYGTVSRYGLIACASSLDQGGPCARTVLDTALLHQVIAGHDPRDSTSVN 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_MACCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Macrococcus caseolyticus (strain JCSC5402) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.963e-18 Identity = 64/216 (29.63%), Postives = 92/216 (42.59%), Query Frame = 2 Query: 161 FINNNEEDIL---------KQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 F+N ++D + + A E P L G+ + +KD I TT +K L DA + +L ILVGK NM E G S N Y NP+D + L P +LG D GGS+R PA+ CGVVG KPT+GR+ G++ ++ +G + V+D V I+G P + + V F Sbjct: 30 FVNIEKDDTVINSFLALDKEAALEKAKTMDNETPSGKLFGIPMGIKDNIVTKDVETTCASKILEGFNSVY-DATVMNKLNAENGILVGKLNMDEFAMGGSTENSFYKKTVNPFDHKAVPGGSSGGSAAAVAASLVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNATVLEVISGLDPHDSTSAPVDNVDF 244
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ACIAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter sp. (strain ADP1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.963e-18 Identity = 64/272 (23.53%), Postives = 118/272 (43.38%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLGKYDAWFN 847 HR +V + ++ + R + + ++ + + ++ ++ E L QA + + G L GV +A KD TT G+K L + P +A V + G + +GK NM E G++ + ++G NP+ ++ L P A G D GGS+R PA+ CG+ G KPT+GR+ G++ ++ G +A + ED + + G +V + +AT++ +++G +FN Sbjct: 5 HRLSVRELAEGLGQAQFSSRELTQHYLNRIDKID---AQVKSYVTVTHEQALAQADAADALRQAGNA-GFLTGVPLAHKDIFCTKGIKTTAGSKMLDNFISPY--NATVVEKANAAGLVTLGKLNMDEFAMGSTSESSYFGATCNPWALDRVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGGPMARSAEDCAYLMNVMAGHDAKDSTSVKKDVDDYVANLNATALKGLRIGIPKQYFN 270
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_WOLWR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 73/239 (30.54%), Postives = 111/239 (46.44%), Query Frame = 2 Query: 98 VAERFITAVRESSNPPMKMSFFINNNEEDILK--QATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY----DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING-----PLPSQQPTVSLPKVS 778 + E I+AV K++ FI E +K +A + +K + IS L GV + +KD TT +K L P + L+ GA ++GK NM E G++ N ++G N + D K+ LC ALG D GGSVR PAA CGVVG KPT+GR G++ ++ G++ +V D+ ++ AI G + S++P +PK+S Sbjct: 26 LVEAHISAVENE-----KLNAFITKTPEIAMKAAKAADEHFSRQKDDLISPLMGVPVGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLK-SGAAMLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICGYDTKDSISSEKP---VPKLS 255
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_WOLTR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=gatA PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATESTLRY--KKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY----DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 K++ FI E +K A + R+ +K IS L G+ + VKD TT +K L P + L+ GA ++GK NM E G++ IN ++G N + D K+ LC ALG D GGSVR PAA CGVVG KPT+GR G++ ++ G++ +V D+ ++ I G Sbjct: 38 KLNAFITKTPEIAIKAAKTADERFSQQKDSTISPLMGIPVGVKDLFCTKGVKTTACSKMLENFIPTYESTVSDLLLK-SGAAMLGKLNMDEFAMGSANINSYFGPVENVWVRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGAKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLETICG 238
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_EHRRW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia ruminantium (strain Welgevonden) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 63/200 (31.50%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 149 KMSFFINNNEEDILKQATEST-LRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +++ FI E L A ++ + + + I+ L G+ + +KD TT + L P D+ V RL GA+++GK NM E G+S N +G NP+ + + LC ALG D GGSVR PAA CG+VG KPT+GR G++ ++ G+L TV+DA ++ I G Sbjct: 38 QLNAFITKTPEVALDAARKADHILIHEQDKITPLTGIPVGIKDLFCTKNIKTTACSNILRNFTP-QYDSTVVKRLIDDGAVMLGKLNMDEFAMGSSNSNSCFGPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRLGMIAFASSLDQAGVLTRTVKDAALMLQPICG 236
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURXL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia xenovorans (strain LB400) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 63/233 (27.04%), Postives = 108/233 (46.35%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 H ++ + A ++ + + +A+ ++ + +++ ++ FI + + L QA + G L G+ IA KD + +T G+K L DA V RL+ G + VGKTNM E G+S N ++G +NP+D + L P A G D GGS+R PA+ G+ G KPT+GR+ G++ ++ G +A + D + A+ G Sbjct: 2 HEKSLTELRAALTARECSAVELAQLYLKRIEAANS----LNAFIQVDPDLTLAQAKAADALLHTGHA-GPLVGLPIAHKDVFVTKGWRSTAGSKMLSNYES-PFDATVVARLQNAGMVCVGKTNMDEFAMGSSNENSYFGPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARSAADCATLLNAMAG 228 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |