FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACHK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus thuringiensis subsp. konkukian GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACCR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACC3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain 03BB102) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACC0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus cereus (strain AH820) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACAN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus anthracis GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus thuringiensis (strain Al Hakam) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus anthracis (strain A0248) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ I +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTITIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ARCB4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Arcobacter butzleri (strain RM4018) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18 Identity = 68/220 (30.91%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 179 EDILKQATESTLRYKKG------EPISVLD------GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLPKVSFPLLKS 796 +DI K + TL+ K+ E ++ D G+ IA+KD I+ + T + L K +A + +L G G+TNM E G+S + YG NP D K+ + ALG D GGS+R PAA CG VG KPT+GR+ G+ + ++ G + VEDA ++Y I+G P+ S ++ V+ P L S Sbjct: 13 DDIKKLRDDLTLKIKESKIGAYVEQLTSTDISQSGVGIPIAIKDNINVKNWEITCSSNIL-KGYISPYNATVIEKLEKAGLSPFGRTNMDEFAMGSSTESSCYGKTLNPIDNEKVPGGSSGGSAAAVAGGIAIAALGTDTGGSIRQPAAYCGCVGMKPTYGRVSRYGITAYSSSLDQCGPITQNVEDAAILYDIISGYDPMDSTSANINYEAVT-PKLNS 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THIDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 67/234 (28.63%), Postives = 106/234 (45.30%), Query Frame = 2 Query: 83 ITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 ++ R +A++++ + + NP + FI + E L +A + G L GV IA KD + TT G+K L V P DA + R + G +GKTNM E G+S +G +NP++ + + P A G D GGS+R PAALCG+ G KPT+G + G++ ++ G +A + ED + I G P ++ K + Sbjct: 18 VSSRELAQQYLDRIA-ALNPTINA--FITVDPEKTLAEAAAADALIAGGAA-GPLTGVPIAHKDIFCTDGWLTTCGSKMLANFVAPY--DAHVIERCKAAGMPSLGKTNMDEFAMGSSNETSFFGAVKNPWNAGYVPGGSSGGAAACVAARMAPAATGTDTGGSIRQPAALCGITGLKPTYGLVSRYGMIAFASSLDQAGPMAPSAEDCARLLNVITGFDPKDSTSLEREKEDY 245 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |