FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THEMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermotoga maritima GN=gatA PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 251 GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 G+ +A+KD I TT ++ L DA V +++ G ++VGK N+ E G+S + RNP+D ++ + ALG D GGSVR PA+LCGVVG+KPT+G + G++ ++ +G + TV DA ++ I+G + TV+ KV F Sbjct: 60 GIPVAIKDNILTLGMRTTCASRILENYESVF-DATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDENDATTVN-RKVDF 234
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOSK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 66/249 (26.51%), Postives = 115/249 (46.18%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY--DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ + A + G+++ + +TA+ ++ P ++ F++ E L QA + R +G L+G+ + +KD + + L +P ++ +L GA+++GK NM E G+S YG A NP+ D ++T LC A G D GGS+R PAA G+VG KPT+GR+ G++ ++ G + +V DA ++ A+ G P + +P F Sbjct: 7 TIAEARDALAKGELSAVDLTMACLTAI-DAGTP---LNAFVHATPEIALDQARAADAR--RGAEAGALNGIPLGIKDLFCTRGVASQAASNILRGFKP-EYESTVTSKLFEAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDSTSADIPVPDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHOS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 66/249 (26.51%), Postives = 115/249 (46.18%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY--DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ + A + G+++ + +TA+ ++ P ++ F++ E L QA + R +G L+G+ + +KD + + L +P ++ +L GA+++GK NM E G+S YG A NP+ D ++T LC A G D GGS+R PAA G+VG KPT+GR+ G++ ++ G + +V DA ++ A+ G P + +P F Sbjct: 7 TIAEARDALARGELSAVDLTMACLTAI-DAGTP---LNAFVHTTPEIALDQARAADAR--RGAGAGALNGIPLGIKDLFCTRGVASQAASNILRGFKP-EYESTVTSKLFEAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTGGSIRQPAAFTGIVGIKPTYGRVSRWGIVAFASSLDQAGPMTKSVRDAAILLGAMAGHDPKDSTSADIPVPDF 248
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosphaera stadtmanae (strain DSM 3091) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 67/253 (26.48%), Postives = 112/253 (44.27%), Query Frame = 2 Query: 47 VLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATS 805 V++ +A +IT E+ + + E ++ ++ F+ + E K A + R K E L G++I +K I+ + + + L + +A + R+ +++G TNM E AG+S YG NP P I +C + LG D GGS+R PA+ CGV+GFKPT+G + G+L L ++ +G A ++ I G P T++ F LK T+ Sbjct: 3 VIEKVEAIKQQEITATENLEQMYSTIEEKNDD---INAFVQLDIEKARKTAEDIDKRIKNNEETGKLAGLVIGIKSNINVEDFIISAASPTLKNYYG-SYNATVINRILDEDGVIIGLTNMDEFAAGSSTETSMYGPTNNPKAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGVMGFKPTYGMVSRQGLLDLAMSLDQIGPFANDTTGIGLMLNVICGYDPYDTTTINKQPEDF--LKDTTN 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BORA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella avium (strain 197N) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 68/218 (31.19%), Postives = 101/218 (46.33%), Query Frame = 2 Query: 98 VAERFITAVR------ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +AER ++AV ++ ++ F++ + E L QA + G L G+ IA KD + +T G+K L DA V RL+ GA+ +GK N E G+ N +G ARNP+D + + L A G D GGSVR PAALCGV G KPT+G + G++ ++ G LA + D L + ++G Sbjct: 20 LAERRVSAVELAESGLAAAQAAAGLNAFLHIDPELTLVQARAADAALAAGTA-GPLAGIPIAHKDAFVTRGWRSTAGSKMLRDYLS-PFDATVVERLQAAGAVSLGKLNCDEFAMGSGNENSAFGPARNPWDLAAVPGGSSGGSAAAVAARLVAGATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMSG 235
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BACWK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus weihenstephanensis (strain KBAB4) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 61/191 (31.94%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE+ +A E + E +L G+ I VKD I + TT +K L P DA V +L+ + +GK NM E G+S N + +NP++ + +LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED + AI+G Sbjct: 43 FLTLDEENARAKAKELDAKIG-AEDNGLLFGMPIGVKDNIVTNGLRTTCASKILANFDPIY-DATVVQKLKAADTVTIGKLNMDEFAMGSSNENSGFYATKNPWNLDYVPGGSSGGSAAAVAAGEVLFSLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQAISG 231
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: AMID_PSEPU (Amidase OS=Pseudomonas putida PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18 Identity = 72/249 (28.92%), Postives = 120/249 (48.19%), Query Frame = 2 Query: 38 RWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFK-PTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 R T+ ++ + +++ V + +T VR S+ + + ++ AT++ +R + P L GV +AVKD D + PTT + H++ D V RL+ GA+++GKT+ HE G I P +RNP DP + +A G D GGSVR+P+++C VG K PT GR+ +GV L+W++ G + TVED ++ + G P+ ++ P S+ Sbjct: 6 RLTLAQVAQKLKAREVSAVEVLDACLTQVR-STEKQISAYVCVLEDQARAAAHATDADIRGRWKGP---LHGVPVAVKDLYDIAGVPTTASSP-AHEL-DAQQDPARVRRLQDAGAVILGKTHTHEFAYGR--ITPK---SRNPRDPGRTPGGSSGGSAATVAACCVYLATGTDTGGSVRIPSSMCNTVGLKQPTVGRVHGAGVSSLSWSLDHPGPITRTVEDTALMLQVMAGFDPADPRSLDEPVPSY 243
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_WOLPM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia pipientis wMel GN=gatA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18 Identity = 68/219 (31.05%), Postives = 101/219 (46.12%), Query Frame = 2 Query: 98 VAERFITAVRESSNPPMKMSFFINNNEEDILK--QATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY----DPSKITXXXXXXXXXXXXXX-LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 + E I+AV K++ FI E +K +A + +K + IS L GV + +KD TT +K L P + L+ GA ++GK NM E G++ N ++G N + D K+ LC ALG D GGSVR PAA CGVVG KPT+GR G++ ++ G++ +V D+ ++ AI G Sbjct: 26 LVEAHISAVENE-----KLNAFITKTPEIAMKAAKAADEHFSRQKDDLISPLMGVPVGIKDLFCTKGIKTTACSKMLENFVPTYESTVSDLLLK-SGAAMLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGIKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLEAICG 238
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRPG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=gatA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18 Identity = 59/181 (32.60%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE LKQA + + K + +++ G+ +AVKD I TT +K LH P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALKQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLHNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BURPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gatA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18 Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 L G+ IA KD + +T G+K L DA V RL+ G + VGKTNM E G+S N ++G +NP+D + L P A G D GGS+R PA+ G+ G KPT+GR+ G++ ++ G +A + D + A+ G Sbjct: 67 LVGLPIAHKDVFVTKGWRSTAGSKMLSNYES-PFDATVVARLQNAGMVCVGKTNMDEFAMGSSNENSYFGPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMAQSAADCATLLNAMAG 228 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |