FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BORPE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella pertussis GN=gatA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18 Identity = 58/163 (35.58%), Postives = 75/163 (46.01%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 L G+ IA KD + TT G+K L DA V RL GA+ +GK N E G+ N YG RNP+D + L A G D GGSVR PAALCGV G KPT+G + G++ ++ G LA + D L + + G Sbjct: 74 LAGIPIAHKDAFVTRGWRTTAGSKMLAGYAS-PFDATVVERLAEAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTQAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGIIAFGSSLDQAGPLAPSSRDLLELLDVMTG 235
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BORBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella bronchiseptica GN=gatA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18 Identity = 68/218 (31.19%), Postives = 97/218 (44.50%), Query Frame = 2 Query: 98 VAERFITAVR------ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 +A R ++AV +++ ++ F++ + E L QA + G L G+ IA KD + TT G+K L DA V RL GA+ +GK N E G+ N YG RNP+D + L A G D GGSVR PAALCGV G KPT+G + G++ ++ G LA + D L + + G Sbjct: 20 LARRQVSAVELAQSGLDAAQAASGLNAFLHIDPELTLAQARAADAALAAGTA-GPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYAS-PFDATVVERLAEAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTRAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMTG 235
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DECAR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dechloromonas aromatica (strain RCB) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.713e-18 Identity = 63/204 (30.88%), Postives = 96/204 (47.06%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRL-CGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E NP + F+ + E L+ A ++ R G L G+ IA KD + +T G+K L V P DA + ++ G + +GKTNM E G+S +G RNP+D ++ L P A G D GGS+R PAALC + G KPT+G + G++ ++ G +AA+ ED ++ + G Sbjct: 32 ERLNPTLNA--FVTVDREKSLQMARDADARIAAGTA-GPLTGIPIAQKDIFCAEGWLSTCGSKMLANFVSPY--DATVIRKMHAEAGLVSLGKTNMDEFAMGSSNETSFFGSVRNPWDTQRVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPAALCNLTGLKPTYGVVSRYGMIAFASSLDQGGPMAASAEDCALLLNTMVG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_OCEIH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Oceanobacillus iheyensis GN=gatA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.461e-18 Identity = 63/192 (32.81%), Postives = 89/192 (46.35%), Query Frame = 2 Query: 161 FINNNEEDILKQATE-STLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ +EE L++A E L K G +L G+ +KD I TT +++L DA V +L+ + VGK NM E G+S N Y RNP++ + LG D GGS+R PAA CGVVG KPT+GR+ G++ ++ +G + TVED V I G Sbjct: 43 FLTLDEEKALEKARELDQLEDKTG----ILFGMPGGIKDNIVTKGLRTTCASQFLDNFNDPLYDATVVQKLQKENMVAVGKLNMDEFAMGSSNENSGYEPTRNPWNTEHVPGGSSGGSAAAVAAGEVLFTLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLVAFASSLDQIGPVTRTVEDNARVLEVIAG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACDB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=gatA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.461e-18 Identity = 63/230 (27.39%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 T+ + SG ++ +A+ I ++++ K++ FI +E+ K A + K L GV IA+KD I + TT + L+ P ++ V +L+ A ++GKTNM E G+S ++G +NP++ +K+ ALG D GGS+R PA+ G+ G KPT+GR+ G++ ++ +G+++ V+D+ V I G Sbjct: 7 TIDSLNDKLKSGAVSADQLAKDTIANIKKTDE---KINAFITVDED--AKPAEDLDFNNK-------LAGVPIAIKDNIITNGLKTTAASHILYNFEPVY-ESTVVAKLKAAQATIIGKTNMDEFAMGSSTETSYFGDTKNPWNLNKVPGGSSGGSAAAVASGEVVAALGSDTGGSIRQPASFNGIFGIKPTYGRVSRWGLIAFASSLDQIGVMSKRVKDSAEVLNVIAG 223
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_RHIRD (Indoleacetamide hydrolase OS=Rhizobium radiobacter GN=tms2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18 Identity = 62/185 (33.51%), Postives = 85/185 (45.95%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING------PLPSQQPTVSLPKVSF 781 L G+ + K I +PT+ T L P RL GA+ NMHEL G + N G RNP++P I L +G D G SVR+PAALCGVVGF+PT GR P ++P++ T GI+A V D +++ I+G P+P + + LP F Sbjct: 66 LCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAE-RLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPDLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYPGDRIIPVSPTRDTPGIIAQCVADVVILDRIISGTPERIPPVPLKGLRIGLPTTYF 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_AGRT9 (Indoleacetamide hydrolase OS=Agrobacterium tumefaciens (strain 15955) GN=tms2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18 Identity = 62/185 (33.51%), Postives = 85/185 (45.95%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING------PLPSQQPTVSLPKVSF 781 L G+ + K I +PT+ T L P RL GA+ NMHEL G + N G RNP++P I L +G D G SVR+PAALCGVVGF+PT GR P ++P++ T GI+A V D +++ I+G P+P + + LP F Sbjct: 66 LCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAE-RLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPDLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYPGDRIIPVSPTRDTPGIIAQCVADVVILDRIISGTPERIPPVPLKGLRIGLPTTYF 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: HYIN_AGRT4 (Indoleacetamide hydrolase OS=Agrobacterium tumefaciens (strain Ach5) GN=tms2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18 Identity = 62/185 (33.51%), Postives = 85/185 (45.95%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING------PLPSQQPTVSLPKVSF 781 L G+ + K I +PT+ T L P RL GA+ NMHEL G + N G RNP++P I L +G D G SVR+PAALCGVVGF+PT GR P ++P++ T GI+A V D +++ I+G P+P + + LP F Sbjct: 66 LCGIPLCFKANIATGVFPTSAATPALINHLPKIPSRVAE-RLFSAGALPGASGNMHELSFGITSNNYATGAVRNPWNPDLIPGGSSGGVAAAVASRLMLGGIGTDTGASVRLPAALCGVVGFRPTLGRYPGDRIIPVSPTRDTPGIIAQCVADVVILDRIISGTPERIPPVPLKGLRIGLPTTYF 249
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_LACLA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactococcus lactis subsp. lactis GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18 Identity = 63/191 (32.98%), Postives = 91/191 (47.64%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 F+ EE L+ A + + + P V DG+ IAVKD I TT +K L P +A +L G I +GK NM E G SG N +N +D +K+ ++LG D GGS+R PAA G+VG KPT+GR+ G++ ++ +G LA TVE+ + I+G Sbjct: 43 FLKITEEKALQDA--AAIDARGINPDVVTDGISIAVKDNIVTEGIETTAASKILGGWIP-PYNATVANKLSESGLITIGKLNMDEFAMGGSGENSSVKPTKNAWDQTKVPGGSSSGSAASVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLAPTVEENAQLLNVISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_BORPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella parapertussis GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18 Identity = 58/163 (35.58%), Postives = 75/163 (46.01%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 L G+ IA KD + TT G+K L DA V RL GA+ +GK N E G+ N YG RNP+D + L A G D GGSVR PAALCGV G KPT+G + G++ ++ G LA + D L + + G Sbjct: 74 LAGIPIAHKDAFVTRGWRTTAGSKMLAGYAS-PFDATVVERLAEAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTRAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMTG 235 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |