FC878075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_THICR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiomicrospira crunogena (strain XCL-2) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 62/250 (24.80%), Postives = 114/250 (45.60%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 H +V + S+ + +IT + + ++ + + +++ ++ E ++ A ++ +G+ +L G+ +A KD TT G+K L + P DA V R G ++GKTNM E G+S + +YG +NP+D + L P+A G D GGS+R PA+ CG+ G KPT+G + G++ + G + + E++ + I G ++ PK + Sbjct: 2 HTLSVKEMSEKLRNKEITSVALTQHYLDRIDQYDG---ELNAYVTVTPELAMEMARQADEMIAEGKG-GLLTGIPVAHKDIFCTLDVKTTCGSKMLDNFIAPY--DAKVVEASRALGMPILGKTNMDEFAMGSSSESSYYGATKNPWDLKAVPGGSSGGSAAVIAAGLAPLATGSDTGGSIRQPASFCGITGIKPTYGAVSRYGMIAYASSFDQGGPMTRSAEESAWLLDVIAGFDERDSTSLEQPKQDY 245
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRA3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus agalactiae serotype III GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 57/191 (29.84%), Postives = 93/191 (48.69%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 FI +++ + QA E + K + +V+ G+ +AVKD I TT +K L+ P DA V +L I++GK NM E G S ++ N +D SK+ ++LG D GGS+R PA+ G+VG KPT+GR+ G+ ++ +G ++ TV++ + I+G Sbjct: 43 FITISDDMAIAQAKE--IDDKGIDADNVMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATAVEKLYAKDMIVIGKANMDEFAMGGSTETSYFKKTNNAWDHSKVPGGSSGGSAAAVASGQVRLSLGSDTGGSIRQPASFNGIVGMKPTYGRVSRFGLFAFGSSLDQIGPMSQTVKENAQLLTVISG 230
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RICAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia akari (strain Hartford) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 71/271 (26.20%), Postives = 121/271 (44.65%), Query Frame = 2 Query: 35 HRWTVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK-----ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA--TSISAIKLG 826 ++ TV D K + D T + + IT + + N ++ ++ + LKQA + Y + +P L+G+ A KD TT + L P ++ + G +++GKTNM E G++ I +G +P+ + + + ALG D GGSVR PA+ G+VGFKPT+GR G++ ++ GI +V D+ ++ A+ G ++ K P L+SA +S+ IK+G Sbjct: 5 NKLTVADSIKGLKNKDFTSKELVNAHITQIEKHRN----LNAYVTETFDLALKQAEAADQNYAQNQP-RTLEGIPFAAKDLFCTKGIRTTACSNILKNFVP-NYESSVTQNIFDKGGVMLGKTNMDEFAMGSANITSCFGNVISPWKANDDNADLVPGGSSGGSAAAVSGFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDAKDSTSI---KAEVPELQSAIGSSMKNIKIG 266
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_RHORT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gatA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 68/249 (27.31%), Postives = 105/249 (42.17%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY-----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING--PLPSQQPTVSLP 769 T+ + A + G TP + + + ++ FI + QA S R + G+ ++G+ I +KD TT G+K L P ++ L GA+++GKTN+ E G+S G NP+ D + L A G D GGS+R PAA CG+VG KPT+GR GV+ ++ G + TV DA ++ A+ G P+ V +P Sbjct: 11 TIAEARDAMAKGAFTPLELTNAHLARMEAGRG----LNAFITETPDLARMQAERSGERLRAGKA-GPMEGIPIGIKDLFCTEGVRTTAGSKILDGFVP-PYESTVSANLAKAGAVMLGKTNLDEFAMGSSNKTSASGPVINPWTRTDDDEQLVPGGSSGGSAAAVAGRLAMAATGTDTGGSIRQPAAFCGLVGLKPTYGRCSRWGVVAFASSLDQAGPMTRTVRDAAIMLKAMAGHDPMDGTSAPVEVP 253
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_STRP6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pyogenes serotype M6 GN=gatA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17 Identity = 57/181 (31.49%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 161 FINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVED 703 FI +EE L+QA + + K + +++ G+ +AVKD I TT +K L+ P DA V I++GKTNM E G S ++ +N +D +K+ ++LG D GGS+R PAA GVVG KPT+G + G++ ++ +G A TV++ Sbjct: 43 FITVSEEAALRQA--AAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIF-DATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKE 220
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_ORITI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Orientia tsutsugamushi (strain Ikeda) GN=gatA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 64/209 (30.62%), Postives = 100/209 (47.85%), Query Frame = 2 Query: 245 LDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY-----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATS--ISAIKLG-KYDAWFN 847 ++G+ +++KD TT +K L P DA ++ G I++GK NM E G++ IN ++G NP+ D + ALG D GGSVR PA+ G VG KP++GR G++ + ++ GI+ TVEDA ++ + G ++ + SL V P L+SA + I +K+G YD N Sbjct: 70 IEGIPVSIKDLFCTKGILTTAASKMLQNFTPVY-DATVYSKIINAGGIMLGKGNMDEFAMGSANINSYFGNVINPWKAENDDIDLTPGGSSGGSSAAVAAFMAMAALGSDTGGSVRQPASYTGTVGIKPSYGRCSRWGMIAFSCSLDQAGIITRTVEDAAIMLETMMG--YDEKDSTSL-NVEVPNLRSAVNQPIKGMKIGIPYDLMEN 274
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DEHSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain CBDB1) GN=gatA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 63/202 (31.19%), Postives = 94/202 (46.53%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E P +K F+ E L QA + K+G+ I L G+ +A+KD + TT +K L P +A V +L GA+L+GKTNM E G+S N Y RNP++ K+ +LG D GGS+R PA+ C V G+KP++G + G++ ++ +G D +V AI G Sbjct: 35 EKLEPEIKA--FMTVCPETALSQAEAADKAIKQGD-IRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVP-PYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_DEHSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain BAV1) GN=gatA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.316e-17 Identity = 63/202 (31.19%), Postives = 94/202 (46.53%), Query Frame = 2 Query: 128 ESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAING 733 E P +K F+ E L QA + K+G+ I L G+ +A+KD + TT +K L P +A V +L GA+L+GKTNM E G+S N Y RNP++ K+ +LG D GGS+R PA+ C V G+KP++G + G++ ++ +G D +V AI G Sbjct: 35 EKLEPEIKA--FMTVCPETALSQAEAADKAIKQGD-IRPLTGIPMALKDVLCTKGIRTTCSSKMLENFVP-PYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAG 232
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METPB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=gatA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17 Identity = 66/251 (26.29%), Postives = 110/251 (43.82%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY-----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ + + D + R +A+ + A+ + ++ +I + LK A S + KGE L+G+ + +KD TT G+K L P ++ +L GA+++GK N+ E G+S YG +P+ D + LC A D GGS+R PAA G VG KPT+GR G++ ++ G +A TV+D ++ ++ G P +V +P F Sbjct: 8 TLAEARDGLKAKDFSAREIAQAHLDAIERAK----ALNAYIVATPDRALKMADVSDEKIAKGEA-RPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHY-ESNVSSQLWRDGAVMLGKLNLDEFAMGSSNETSAYGKTISPWRRQGSDTPLVPGGSSGGSAAAVAAHLCLGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDPRDTTSVDVPVPDF 252
BLAST of FC878075 vs. ExPASy Swiss-Prot
Match: GATA_METC4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=gatA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17 Identity = 66/251 (26.29%), Postives = 110/251 (43.82%), Query Frame = 2 Query: 44 TVLDYSKAYSSGDITPRMVAERFITAVRESSNPPMKMSFFINNNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY-----DPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSF 781 T+ + + D + R +A+ + A+ + ++ +I + LK A S + KGE L+G+ + +KD TT G+K L P ++ +L GA+++GK N+ E G+S YG +P+ D + LC A D GGS+R PAA G VG KPT+GR G++ ++ G +A TV+D ++ ++ G P +V +P F Sbjct: 8 TLAEARDGLKAKDFSAREIAQAHLDAIDRAK----ALNAYIVATPDRALKMAEVSDQKIAKGEA-RPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHY-ESNVSSQLWRDGAVMLGKLNLDEFAMGSSNETSAYGKTISPWRRQGSDAPLVPGGSSGGSAAAVAAHLCLGATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIIAYASSLDQAGPIARTVQDCAILLGSMAGHDPRDTTSVDMPVPDF 252 The following BLAST results are available for this feature:
BLAST of FC878075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878075 ID=FC878075; Name=FC878075; organism=Citrus clementina; type=EST; length=849bpback to top |