FC878125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.602e-20 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 558 KNQLKRVCHVPAEGLSSDVWAWRKYGQKPIKGSPYPRGYYRCSS--SKGCLARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGST 818 ++++K+V +PA D+W WRKYGQK I GS +PRGYYRC+ + GC A KQV+R+ +D M +TY +EHNHP PT R +LA ST Sbjct: 1193 ESRVKKVVSIPAID-EGDLWTWRKYGQKDILGSRFPRGYYRCAYKFTHGCKATKQVQRSETDSNMLAITYLSEHNHPRPTKRKALADST 1280
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20 Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 558 KNQLKRVCHVPAEG-----LSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNH 779 K+++KRV VPA + SD ++WRKYGQKPIKGSP+PRGYY+CSS +GC ARK VER D M IVTY +HNH Sbjct: 260 KSRVKRVIRVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNH 338
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 558 KNQLKRVCHVPAEG-----LSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGS 815 KN++KR VPA + D ++WRKYGQKPIKGSP+PRGYY+CS+ +GC ARK VER D M IVTY EH H T + + S Sbjct: 222 KNRMKRTVRVPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRHHQSTMQEHVTPS 312
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 558 KNQLKRVCHVPA-----EGLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNH 779 K +++R VPA + +D ++WRKYGQKPIKGSP+PRGYY+CSS +GC ARK VER DP M IVTY +HNH Sbjct: 311 KLRIRRSIKVPAISNKVADIPADEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNH 389
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 558 KNQLKRVCHVPA-----EGLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNH 779 K + +R+ VPA + D ++WRKYGQKPIKGSP+PRGYY+CSS +GC ARK VER D M IVTY +HNH Sbjct: 219 KIKQRRIIRVPAISAKMSDVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNH 297
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 558 KNQLKRVCHVPA-----EGLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNH 779 K ++KR VPA + D ++WRKYGQKPIKGSP+PRGYY+CSS +GC ARK VER + M IVTY EHNH Sbjct: 241 KLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNH 319
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 558 KNQLKRVCHVPA-----EGLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNH 779 K ++KR VPA + D ++WRKYGQKPIKGSP+PRGYY+CSS +GC ARK VER + M IVTY EHNH Sbjct: 241 KLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNH 319
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 609 DVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNS 803 D + WRKYGQK +K SPYPR YYRC++ K C +K+VER+ DP + I TY ++HNHP PT+R + Sbjct: 184 DGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSYQDPTVVITTYESQHNHPIPTNRRT 247
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 3 Query: 609 DVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNHPAPTH 794 D + WRKYGQK +K SPYPR YYRC++ K C +K+VER+ DP + I TY +HNHP PT+ Sbjct: 173 DGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPTVVITTYEGQHNHPIPTN 233
BLAST of FC878125 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 3 Query: 609 DVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPGMFIVTYTAEHNHPAPT 791 D + WRKYGQK +K SPYPR YYRC++ K C +K+VER+ DP + I TY +HNHP P+ Sbjct: 137 DGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPSIVITTYEGKHNHPIPS 196 The following BLAST results are available for this feature:
BLAST of FC878125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878125 ID=FC878125; Name=FC878125; organism=Citrus clementina; type=EST; length=819bpback to top |