FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_ARATH (Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PYRB PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16 Identity = 57/164 (34.76%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 244 KAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYL--GPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 K E +D + FD+ + I D A E++ + KS +S + KG M+ +F +PS RTR+SFE+ LGG + + K E D R + Y+DII+ R F A A +PVIN G HP Q + D TI +G+L+G V VGD Sbjct: 81 KFELSDVIEGKQFDREMLSAIFDVAREMEKIEKSSSQSEI-LKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARKAAATANIPVINAGDGPGEHPTQALLDVYTIQSEIGKLDGISVALVGD 243
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_NEIPE (Ornithine carbamoyltransferase (Fragment) OS=Neisseria perflava GN=argF PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16 Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 451 GGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGR-LEGTKVVYVGDGN-NVVHSWLLMAS 765 G A YL P Q+G +E +D ARVL R D I R FG + I +LAK+A VPV NGLT+ HP Q++ADALT+ EH + L T YVGD N+ +S L++ + Sbjct: 3 GAGATYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEIIEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSSKPLNQTAFAYVGDARYNMGNSLLILGA 109
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_NEIFV (Ornithine carbamoyltransferase (Fragment) OS=Neisseria flava GN=argF PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16 Identity = 51/119 (42.86%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 451 GGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGR-LEGTKVVYVGDGN-NVVHSWLLMASVIPFHFVCACPK 801 G YL P Q+G +E +D ARVL R D I R FG + +LAK+A VPV NGLT+ HP Q+ ADALT+ EH G+ L T YVGD N+ +S L++ + + PK Sbjct: 3 GAGVTYLEPSASQIGHKESIKDTARVLGRMYDGIEYRGFGQDVVEELAKYAGVPVFNGLTNEFHPTQMFADALTMREHSGKPLNQTAFAYVGDARYNMANSLLVLGAKLGMDVRIGAPK 121
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_THETN (Aspartate carbamoyltransferase OS=Thermoanaerobacter tengcongensis GN=pyrB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15 Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASV 768 D L I D + I++ILD A E+K LL +G++ +GKT+ IF +PS RTR+SFE LG H + + K E D R + R D+I+ R LAK+ +ING N HP Q + D +TI E G +G KV +GD ++HS + +++ Sbjct: 5 DLLGIKDLTREEILEILDLAFEMKKLL-NGEKYSQALRGKTVVTIFFEPSTRTRLSFEMAAKYLGAHYGNIEVATSSVVKGESLIDTIRTVERMKADVIVTRHNMSGTPHLLAKYTNASIINGGDGINEHPTQALLDMMTIKEKKGDFKGLKVAIIGD---IMHSRVARSNI 172
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METVS (Aspartate carbamoyltransferase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pyrB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.508e-15 Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + + D + I++IL+ + +++A+L S + GK ++ +F +PS RTR+SFET LGG+ I + + + K E D +V+ Y+D+I+ R ++ + VPVIN G HP Q + D TI VG+++G K+ ++GD Sbjct: 5 ISMRDIGRDDILRILEESEKMEAVLNEKGHSDI-LNGKILATLFYEPSTRTRLSFETAMKRLGGNVIGFTDISNTSVTKGESLTDTIKVISGYSDLIVIRHPSEGAARLSSEVSGVPVINAGDGSNQHPTQTLLDLYTIKREVGKIDGLKIAFIGD 159
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_NEISU (Ornithine carbamoyltransferase (Fragment) OS=Neisseria subflava GN=argF PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.193e-15 Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 451 GGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGR-LEGTKVVYVGDGN-NVVHSWLLMASVIPFHFVCACPK 801 G YL P Q+G +E +D ARVL R D I R FG + +LAK+A VPV NGLT+ HP Q++ADALT+ EH + L YVGD N+ +S L++A+ + PK Sbjct: 3 GAGVTYLEPSASQIGHKESIKDTARVLGRMFDGIEYRGFGQDVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSDKPLNQIAFAYVGDARYNMANSLLVLAAKLGMDVRIGAPK 121
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METBF (Aspartate carbamoyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pyrB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.395e-15 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP-DDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + + DF + I ILD A +++ + + RS L GK ++++F +PS RTR+SFE+ LGG + LG + + K E D RV+ +Y D+I+ R A+FA+VP+ING +HP Q D T I LEG K+ GD Sbjct: 9 ISMKDFSRKEINYILDTAEKLEPVARGKKRSRL-LDGKIIALLFFEPSTRTRLSFESAAQRLGGQVLNLGSVEASSVMKGENLADTIRVISKYADLIVLRHPLDGSARMAAEFASVPIINGGDGSLHHPTQTFLDLYT-IRRESHLEGLKIAMAGD 162
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METAC (Aspartate carbamoyltransferase OS=Methanosarcina acetivorans GN=pyrB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.227e-14 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP-DDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + + DF + I +LD A +++ + + +RS L GK +S++F +PS RTR+SFE LGG A+ LG + + K E D RV+ +Y D+I+ R A+FA+VPVING +HP Q D T I LE ++ GD Sbjct: 9 ISMKDFSREEIDHVLDTAEKLEPVARGEERSRL-LDGKIVSLLFFEPSTRTRLSFEAATQRLGGQALNLGSVEASSVMKGENLADTIRVISKYADLIVLRHPLDGSARMAAEFASVPVINGGDGSVHHPTQTFLDLYT-IRRESHLEDLRIAMAGD 162
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_META3 (Aspartate carbamoyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pyrB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.227e-14 Identity = 50/157 (31.85%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 F+ I D K I+ IL+ A +++ LL S S + GK ++ +F +PS RTR+SFET LGG + + + + K E D +V+ Y D+I+ R +++ +P+IN G HP Q M D TI +G ++ K+ ++GD Sbjct: 4 FISIRDIGKKEILNILEEAEKMEELLNSEKHSNI-MNGKILATLFYEPSTRTRLSFETAMKRLGGTVVGFTDIANTSVMKGETLPDTIKVINGYADLIVMRHPSDGAPRLACEYSNIPIINAGDGSNQHPSQTMLDLYTIKREIGHIDNIKIAFIGD 159
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METMA (Aspartate carbamoyltransferase OS=Methanosarcina mazei GN=pyrB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.093e-14 Identity = 56/156 (35.90%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP-DDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + + DF + I ILD A +++ + + +RS L GK +S++F +PS RTR+SFE LGG + LG + + K E D RV+ +Y D+I+ R +FA VPVING +HP Q D T I LEG K+ GD Sbjct: 10 ISMKDFSREEIDYILDIAEKLEPVARGEERSRL-LDGKIISLLFFEPSTRTRLSFEVATRRLGGQVLSLGSVEASSVMKGENLADTIRVISKYADLIVLRHPLDGSARMATEFAAVPVINGGDGSVHHPTQTFLDLYT-IRRESHLEGLKIAMAGD 163 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |