FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METST (Aspartate carbamoyltransferase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=pyrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.022e-13 Identity = 60/188 (31.91%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFAT----VPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACP 798 + + I DF K+ + IL+ A E++ + KS + GK + ++F +PS RTR+SFET LGG + + + K E D A+++ +Y D I+ R D+ A+F + VPVIN G HP Q M D TI +G L+ K+ VGD VHS + ++ V P Sbjct: 7 NIISIRDFKKSDVEYILNLAEEMEPIAKS-QKVCHEKDGKLLGVMFYEPSTRTRLSFETAMKRLGGDVVGFNQKQGTSIQKGEVLYDTAQIVSQYTDAIVLR----HDMEGAARFVSNIVDVPVINAGDGAGQHPTQTMLDLYTIKRTLGELKNLKIALVGDLKYGRTVHSLVYALAMFNVEIVFISP 189
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METKA (Aspartate carbamoyltransferase OS=Methanopyrus kandleri GN=pyrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.022e-13 Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYL-GPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD 726 D + + DF + + ++L A E++ + + G L GK ++ +F PS RTR+SFE+ LGG I L G + K E D R + Y D+I+ R A+ VPVIN N HP Q D TI++ GR+ G ++ +GD Sbjct: 8 DVISVRDFTRKELEELLSHAEEMERVYERGGDDRL--SGKILATLFFSPSTRTRLSFESAMHRLGGDVISLGGKEAASTAKGENLADTVRTVEHYCDVIVLRHPKEGAARLAAELTDVPVINAGDGANQHPTQTFLDLYTIMKEKGRIGGLRIGLLGD 163
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_ALKMQ (Aspartate carbamoyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pyrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.022e-13 Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 370 KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKR-EETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIP-FHFVCACP 798 KGK + +F +PS RTR+SFE+ +GG + + K+ E D RVL Y D+++ R L +++ATVP++NG + HP Q + D +TI + G++E KV + GD VHS L S P FV P Sbjct: 41 KGKILGTLFYEPSTRTRLSFESAMLRMGGTVLGFSDANTSSAKKGESIADTIRVLDDYADLLVMRHPREGAPLLASQYATVPIVNGGDGGHQHPTQTLTDLITIHHNKGKIENLKVAFCGDLLFGRTVHSLLKTLSRFPNMEFVFISP 188
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_NEIM0 (Aspartate carbamoyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=pyrB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.947e-13 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + ISD + + +L A ++KA + GD +GK + F +PS RTR+SFET LGG I K+ ET D AR++ Y D I+ R A+F+ VPVIN N HP Q + D +TI E GRL+ K+ GD Sbjct: 11 ISISDLSREQLECLLQTALKLKAHPR-GDL----LEGKLIGSCFFEPSTRTRLSFETAVQCLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAIIQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAGD 161
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_NEIG1 (Aspartate carbamoyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=pyrB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.947e-13 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + ISD + + +L A ++KA + GD +GK + F +PS RTR+SFET LGG I K+ ET D AR++ Y D I+ R A+F+ VPVIN N HP Q + D +TI E GRL+ K+ GD Sbjct: 11 ISISDLSREQLEYLLQTALKLKAHPR-GDL----LEGKLIGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAIVQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAGD 161
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_CORGL (Aspartate carbamoyltransferase OS=Corynebacterium glutamicum GN=pyrB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.947e-13 Identity = 63/188 (33.51%), Postives = 87/188 (46.28%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLP-FKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMARVFGHQDILDLAKFATV-----PVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACP 798 L ISD K I+ +LD A K +L+ + LP +G+T+ +F + S RTR SFET + I + + K E +D L D I+ R LA+F VIN G + HP Q + DALTI + GR+EG KVV VGD + VV S + + S + V P Sbjct: 5 LSISDLSKDEIVGLLDEADRFKEVLEGREVKKLPTLRGRTIFTLFYENSTRTRSSFETAGKWMSADVINISASSSSVKKGESLKDTGLTLSAIGADAIIMRHPASGAAQQLAQFVAPGGNGPSVINAGDGSHQHPTQALLDALTIRQRTGRIEGLKVVIVGDCLHSRVVRSNVDLLSTLGAEVVLVAP 192
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_CORGB (Aspartate carbamoyltransferase OS=Corynebacterium glutamicum (strain R) GN=pyrB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.947e-13 Identity = 63/188 (33.51%), Postives = 87/188 (46.28%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLP-FKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMARVFGHQDILDLAKFATV-----PVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACP 798 L ISD K I+ +LD A K +L+ + LP +G+T+ +F + S RTR SFET + I + + K E +D L D I+ R LA+F VIN G + HP Q + DALTI + GR+EG KVV VGD + VV S + + S + V P Sbjct: 5 LSISDLSKDEIVGLLDEADRFKEVLEGREVKKLPTLRGRTIFTLFYENSTRTRSSFETAGKWMSADVINISASSSSVKKGESLKDTGLTLSAIGADAIIMRHPASGAAQQLAQFVAPGGNGPSVINAGDGSHQHPTQALLDALTIRQRTGRIEGLKVVIVGDCLHSRVVRSNVDLLSTLGAEVVLVAP 192
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_NEIMF (Aspartate carbamoyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=pyrB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + ISD + + +L A ++KA + GD +GK + F +PS RTR+SFET LGG I K+ ET D AR++ Y D I+ R A+F+ VPVIN N HP Q + D +TI E GRL+ K+ GD Sbjct: 11 ISISDLSREQLECLLQTALKLKAHPR-GDL----LEGKLIGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAIIQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAGD 161
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_NEIMB (Aspartate carbamoyltransferase OS=Neisseria meningitidis serogroup B GN=pyrB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + ISD + + +L A ++KA + GD +GK + F +PS RTR+SFET LGG I K+ ET D AR++ Y D I+ R A+F+ VPVIN N HP Q + D +TI E GRL+ K+ GD Sbjct: 11 ISISDLSREQLECLLQTALKLKAHPR-GDL----LEGKLIGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAIIQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAGD 161
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_NEIMA (Aspartate carbamoyltransferase OS=Neisseria meningitidis serogroup A GN=pyrB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + ISD + + +L A ++KA + GD +GK + F +PS RTR+SFET LGG I K+ ET D AR++ Y D I+ R A+F+ VPVIN N HP Q + D +TI E GRL+ K+ GD Sbjct: 11 ISISDLSREQLECLLQTALKLKAHPR-GDL----LEGKLIGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAIIQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAGD 161 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |