FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_BRAHW (Aspartate carbamoyltransferase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12 Identity = 60/186 (32.26%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFA----TVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGDG--NNVVHSWL--LMASVIPFHFV 786 +F+ I + K ++++LD A E+ R + G M+ IF +PS RTR+SF + LG + + P+ + K E RD ++ Y+DII+ R I AKFA P+IN N HP Q + D T+ E +G +E KV +VGD VHS + LM F+F+ Sbjct: 3 NFISIKELSKEEVIEVLDVAKELDNADSKERRKIMD--GMIMTSIFFEPSTRTRLSFTSAAYRLGCKELGFDNPEQSSVKKGESLRDTIIMVSAYSDIIVMR----HSIDGAAKFAEEVTNCPIINAGDGANEHPSQTLLDLYTLREELGTIENQKVAFVGDTRYGRTVHSLVDGLMMFNGQFYFI 182
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_BACFR (Aspartate carbamoyltransferase OS=Bacteroides fragilis GN=pyrB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12 Identity = 57/185 (30.81%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 250 EQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLL-MASVIP-FHFV 786 E + I++ + I+ +L+ A + + K+ +R L +GK ++ +F +PS RTR+SFET + LG I + P K E +D ++ Y D+I+ R + ++ A VP++N N HP Q M D +I + G LE + VGD VHS L+ M P FHF+ Sbjct: 2 ENRSLVTIAEHSREKILYMLEMAKQFE---KNPNRRLL--EGKVVATLFFEPSTRTRLSFETAANRLGARVIGFSDPKATSSSKGETLKDTIMMVSNYADVIVMRHYLEGAARYASEVAPVPIVNAGDGANQHPSQTMLDLYSIYKTQGTLENLNIYLVGDLKYGRTVHSLLMAMRHFNPTFHFI 181
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_BACFN (Aspartate carbamoyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12 Identity = 57/185 (30.81%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 250 EQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLL-MASVIP-FHFV 786 E + I++ + I+ +L+ A + + K+ +R L +GK ++ +F +PS RTR+SFET + LG I + P K E +D ++ Y D+I+ R + ++ A VP++N N HP Q M D +I + G LE + VGD VHS L+ M P FHF+ Sbjct: 2 ENRSLVTIAEHSREKILYMLEMAKQFE---KNPNRRLL--EGKVVATLFFEPSTRTRLSFETAANRLGARVIGFSDPKATSSSKGETLKDTIMMVSNYADVIVMRHYLEGAARYASEVAPVPIVNAGDGANQHPSQTMLDLYSIYKTQGTLENLNIYLVGDLKYGRTVHSLLMAMRHFNPTFHFI 181
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_AERPE (Aspartate carbamoyltransferase OS=Aeropyrum pernix GN=pyrB PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.558e-12 Identity = 51/158 (32.28%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYL-GPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTD-YNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 D + I+DF + + + +A +++ K+G + P GK +++ F +PS RTR+SFET LGG + + G + I + K E D +L Y D I+ R L A+ A PVING +HP Q M D T+ G ++G +GD Sbjct: 10 DVISITDFTRGDLELLFRQADVIES--KAGSK---PLDGKVVALAFFEPSTRTRLSFETAVKRLGGSTLLISGEEAISVAKGENLADTITMLDSYADAIVIRHRYEGAALYAAEVAEKPVINGGDGRQHHPTQAMLDLYTVYSLFGTVDGLTYGVLGD 162
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_THENV (Aspartate carbamoyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12 Identity = 51/158 (32.28%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTD-YNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 D + DF + + ++ + A ++ KS FL +G+ M++ F +PS RTR+SFE LGG I + G + + K E D ++L Y+D+I+ R A+ A PVING +NHP Q M D T+ G ++G V +GD Sbjct: 6 DVISARDFGRRDLEELFETARYMEKYSKSR-LEFL--RGRVMAVAFFEPSTRTRLSFEVAMRRLGGDVIGFWGAEGTSVEKGETLVDTVKMLDAYSDVIVVRHRYEGASKLAAEVAESPVINGGDGAFNHPTQAMLDVYTMWREFGTVDGLNVGLIGD 160
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METHJ (Aspartate carbamoyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12 Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDI-QMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDY-NHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 + I D D+ I ++L RA EV A + P KGK + ++F +PS RTR+SFE+ LGG + LG ++ M K E D RV+ Y D I+ R ++F+ +P++NG HP Q + D TI + + L+ + +GD Sbjct: 5 ISIHDLDRDQIDRLLARAGEVTAEFAGKE----PLKGKILGLLFFEPSTRTRMSFESAMLRLGGSCMNLGGVEVSSMAKGETLADTIRVVSGYADAIVLRHPKVGAARLASEFSEIPILNGGDGAGQHPSQTLIDLYTIRQSMS-LDNIHIGLIGD 155
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_HYPBU (Aspartate carbamoyltransferase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 D + I DFD+ ++ ++ + A + +LL+ R L +G +++ F +PS RTR+SFET LG I + + I + K E D R+L Y D+I+ R L A+ A PVIN G +HP Q M D T+ + G ++G +GD Sbjct: 11 DVISILDFDRDSLEQLFEVADKFSSLLRERGRIPL-LEGYIVALAFFEPSTRTRLSFETAAKRLGADTIGFTSEEAISIAKGETLADTIRMLDSYADMIVLRHRYEGAALYAAEIAEHPVINAGDGKQHHPTQAMLDLYTVRKLFGTIDGLTYGVLGD 167
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYR1_YEAST (Protein URA1 OS=Saccharomyces cerevisiae GN=URA2 PE=1 SV=4) HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12 Identity = 52/165 (31.52%), Postives = 77/165 (46.67%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALL-KSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLT-DYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHS 747 L I F ++ + A E++A + + G + KG ++ IF +PS RT SF LGG + + P + K E +D R L Y+D I+ R + AK++ VP+ING HP Q D TI E +G + G V ++GD VHS Sbjct: 1914 LSIKQFKRSDFHVLFAVAQELRAAVAREGVLDLM--KGHVITTIFFEPSTRTCSSFIAAMERLGGRIVNVNPLVSSVKKGETLQDTIRTLACYSDAIVMRHSEEMSVHIAAKYSPVPIINGGNGSREHPTQAFLDLFTIREEIGTVNGITVTFMGDLKHGRTVHS 2076
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_THEGJ (Aspartate carbamoyltransferase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12 Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPF-KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFV 786 D + I DF K+ I +L A ++ L+ ++ L + +GK ++ +F +PS RTR+SFE+ LGG I + + K E D R + +Y+D+I+ R A+ A VPVIN G HP Q + D TI G+++G + +GD VHS +A + F+ V Sbjct: 7 DVISIRDFSKSDIEFVLKVAERLEEELR--EKGSLEYARGKILATLFFEPSTRTRLSFESAMHRLGGSVIGFSSASSTSVRKGESLADTIRTVEQYSDVIVIRHPMEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYTIKRAFGKIDGLTIGLLGDLKYGRTVHS---LAEALAFYDV 182
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_MOOTA (Aspartate carbamoyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=pyrB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 244 KAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRY-NDIIMARVFGHQDILDLAKFATVPVINGLTD-YNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASV 768 + ++ D L + D I IL+ AA +K +L + +GK + +F +PS RTR SFE +G + + + K E RD AR L D ++ R LA+ V+NG + HP Q + D TI E +G +G KV +GD ++HS + +++ Sbjct: 2 RLQRKDLLGLKDLSAEEIELILETAAPMKEILGRDIKKVPTLRGKLVVTMFYEPSTRTRTSFELAAKYMGADTMSIATATSSVQKGESLRDTARTLAAMGTDAVIIRHSAAGSPALLARTIEASVLNGGDGMHEHPTQALLDMFTIKEKLGGFKGLKVAILGD---ILHSRVARSNI 175 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |