FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_CLOP1 (Aspartate carbamoyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pyrB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 373 GKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 GK ++ +F +PS RTR+SFE+ LGG I + P+ + K E RD + + Y D+I R + ++ +PVIN G + HP Q + D LTI E+ G LEG + GD Sbjct: 41 GKILATLFYEPSTRTRLSFESAMLRLGGQVIGFSEPNSSSVSKGESLRDTIKTVNCYADLIAMRHPLEGAAKVASMYSDIPVINAGDGGHQHPTQTLTDLLTIKEYKGNLEGNTIALCGD 160
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB3_SHEHH (Aspartate carbamoyltransferase 3 OS=Shewanella halifaxensis (strain HAW-EB4) GN=pyrB3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12 Identity = 60/181 (33.15%), Postives = 87/181 (48.07%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVI--PFHFV 786 + ISD ++ + I+ A + LK R L K K ++ F + S RTR+SFET LGG I + + +GK+ ET D+ +V+ Y D R ++F++ PVING N HP Q + D +I E G LE +V +VGD VHS S+ FHF+ Sbjct: 11 ISISDLSRSELELIVSTAND----LKQNPRPDL-LKNKVVASCFFEASTRTRLSFETAVQRLGGSVIGFPDSGNTSLGKKGETLADSVQVISSYCDAFFMRHNQEGAARLASEFSSAPVINGGDGSNQHPTQTLLDLFSIYETQGTLEKLQVAFVGDLKYGRTVHSLTQALSLFDCEFHFI 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_TOLAT (Aspartate carbamoyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=pyrB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.270e-11 Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACPK 801 + L I+D + + ++ A++ LK R L + K ++ F + S RTR+SFET LGG I + + + K+ ET D+ RV+ Y D + R A+F++VPVIN N HP Q + D +I E G L+G K+ +VGD VHS S+ F P+ Sbjct: 9 NILSIADLSRTDLELVVQTASQ----LKQSPRHDL-LQHKVIASCFFEASTRTRLSFETAVHRLGGSVIGFADAGNTSLAKKGETLADSVRVITSYTDAFVIRHPQEGAARLSAEFSSVPVINAGDGSNQHPTQTLLDLFSIYETQGTLDGLKLAFVGDLKYGRTVHSLAQALSLFGARFYFISPE 189
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_SALTO (Aspartate carbamoyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=pyrB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.658e-11 Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVI 771 L +D D T ++ILD AAE+ + + +G+T+ +F + S RTR+SFE L I + K E +D A L D ++ R LA + V+N G + HP Q + DA T+ +GRL G V VGD V+HS + ++V+ Sbjct: 6 LSSADLDAGTALQILDTAAEMATVAGREVKKLPALRGRTVVNLFYEDSTRTRISFEAAAKRLSADVINFSVKGSSVAKGESLKDTALTLQAMGADAVVVRHPASGAPYQLADWVDGSVVNAGDGTHEHPTQALLDAYTMRSRLGRLAGLSVAVVGD---VLHSRVARSNVL 173
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_SACD2 (Aspartate carbamoyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=pyrB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.658e-11 Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 244 KAEQTDFLHISDFDKATIMKILDRAAEVK--ALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYL-GPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTI---IEHVGR-LEGTKVVYVGD--GNNVVHS 747 K + L + F++A I +I A ++ AL + R +G + +F +PS RTRVSF F+LLGG G + K E D ARVL Y+D+I R + + A+ + VPVING N HP Q + D TI + GR L+G ++ +GD VHS Sbjct: 2 KFSGSHILSVEQFERADIERIFAVADSMEPYALRQKVTRVL---EGAILGNMFFEPSTRTRVSFGCAFNLLGGEVRETTGFKSSAIAKGESLYDTARVLSGYSDVICMRHPQEGSVAEFAQASRVPVINGGDGANEHPSQALLDLYTIQKELRDKGRSLDGLRIAMIGDLKHGRTVHS 176
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_PICTO (Aspartate carbamoyltransferase OS=Picrophilus torridus GN=pyrB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.658e-11 Identity = 53/171 (30.99%), Postives = 80/171 (46.78%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPD-DIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMAS 765 + I+D + I + A + LK+G + G+ M+ +F +PS RTR+SFE+ LGG I + K E D R++ Y+DII+ R + KF++ PVIN G HP Q + D TI + G + ++ +GD VHS LL S Sbjct: 8 ISINDLSDEDLNLIFNTADSMAGNLKNGSQ-IKTMSGRIMATLFFEPSTRTRLSFESAMQRLGGSVISMADSKSSSTAKGETLADTTRMVSSYSDIIVVRHPLEGAARLVQKFSSRPVINAGDGSGEHPTQTLVDLYTIKKSFGDINNLEISIIGDLRYGRTVHSLLLALS 177
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTCC_STRPY (Ornithine carbamoyltransferase, catabolic (Fragment) OS=Streptococcus pyogenes GN=arcB PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.658e-11 Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYND 546 FL DF +A + ++D +A +K L K G +GK ++++F K S RTR +F T LG H YLG +DIQ+GK+E T D A+VL R D Sbjct: 10 FLAEKDFTRAELEYLIDFSAHLKDLKKRGVPHHY-LEGKNIALLFEKTSTRTRAAFTTAAIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMFD 103
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_CLOPH (Aspartate carbamoyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=pyrB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11 Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 1 Query: 370 KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 +GK ++ +F +PS RTR+SFE LGG + + D K E D RV+ Y DI R L + ++++PVIN G +NHP Q + D LTI GRL+ + + GD Sbjct: 37 QGKKLATLFYEPSTRTRLSFEAAMLNLGGSVLGFSSADSSSAAKGESVADTIRVISSYADICAMRHPKEGAPLVASTYSSIPVINAGDGGHNHPTQTLTDLLTIKNLKGRLDNLTIGFCGD 157
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_PARD8 (Aspartate carbamoyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=pyrB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 271 ISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLL-MASVIP-FHFV 786 I K I++ILD A + + ++ +R L +GK + +F +PS RTR+SFET + LGG I + K E +D ++ Y D+I+ R ++ VP+IN N HP Q M D +I + G+L+ + VGD VHS ++ M+ P FHFV Sbjct: 9 IDQCSKEDILRILDNARKFE---ENPNRKLL--EGKVAATLFFEPSTRTRLSFETAVNRLGGRVIGFSDASTTSSSKGETLKDTILMVSNYVDLIIMRHHLEGAARYASEVTDVPIINAGDGANQHPSQTMLDLYSIRKTQGKLDNLTITMVGDLKYGRTVHSLIVGMSHFHPTFHFV 181
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_METPE (Aspartate carbamoyltransferase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pyrB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11 Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP-DDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 DF+ I DFD+A I +++ A + L KGK ++++F +PS RTR+SFE + LGG ++ L + M K E D RV+ Y D I+ R ++ ++VPVIN G HP Q + D TI + + ++G + +GD Sbjct: 3 DFISIRDFDRAAIDRLIAEAERID----HHQYDPLEMKGKILALLFFEPSTRTRMSFEAAMARLGGTSLTLSSFEASSMAKGETLADTIRVVSGYVDAIVLRHPREGAARLASEVSSVPVINAGDGAGQHPSQTLLDLYTIRQSM-PIDGINIGLLGD 155 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |