FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_RHIME (Ornithine carbamoyltransferase OS=Rhizobium meliloti GN=argF PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.945e-36 Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKG 804 FL +S + I+D A K+ K+G P GK ++MIF KPS RTRVSF+ G LGG ++L ++Q+G+ E D A+VL RY D IM R H+ +L++A+ ATVPVINGLTD HPCQIMAD LT EH G ++G + + GDGNNV+HS + ++ + A P G Sbjct: 5 FLDLSAMTATDLRTIIDDARVRKSATKAGTAE-KPLAGKMLAMIFEKPSTRTRVSFDVGMRQLGGETLFLSGTEMQLGRAETIGDTAKVLSRYVDAIMIRTTDHRRLLEMAEHATVPVINGLTDDTHPCQIMADILTFEEHRGPVKGKTIAWTGDGNNVLHSLIEGSARFGYRMNMAVPLG 184
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METHJ (Ornithine carbamoyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=argF PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.945e-36 Identity = 79/183 (43.17%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 DF+ I D + + ++ A ++K + G ++ + KT+ MIF K S RTR+SFE G LGGHA++L P D+Q+G+ E RD ARV+ R+ IM R H ++L+LA A +PVINGL+D HPCQI+AD +TI E + R EG KV ++GDGNNV S +L + + A P F Sbjct: 4 DFISILDISREELANLIAHARKLKEERRVGIQTPV-LAHKTLGMIFEKSSTRTRISFEAGMFELGGHALFLNPKDMQLGRGEAIRDTARVMSRFVSAIMIRANRHDEVLELAAHADIPVINGLSDREHPCQILADIMTIEERLFRTEGVKVAWIGDGNNVCTSLILSTILTGMEVIVASPSEF 185
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_ROSDO (Ornithine carbamoyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=argF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.541e-36 Identity = 86/184 (46.74%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSF----LPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPK 801 FL I D A + +I+D+AA +K+ K R P K + +++IF KPS RTRVSF+ G +GG + L D+Q+G E D ARVL RY D+IM R F + ++A+FATVPVINGLTD HPCQIMAD LT EH G + G KVV+ GDGNNV S+L A F P+ Sbjct: 4 FLDIHLTDPADLREIIDQAAIMKSARKGRPRGAPDDTQPLKDRIVALIFEKPSTRTRVSFDVGVRQMGGQTMVLSGADMQLGHGETIADTARVLSRYVDLIMIRTFDEAVLTEMAEFATVPVINGLTDRTHPCQIMADILTFEEHRGPIAGKKVVWSGDGNNVCASFLHAAGQFGFDLTFTGPQ 187
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_HUMAN (Ornithine carbamoyltransferase, mitochondrial OS=Homo sapiens GN=OTC PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.541e-36 Identity = 79/193 (40.93%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 229 IHGKPKAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 + K + + D L + +F I +L +A++K +K +GK++ MIF K S RTR+S ETGF+LLGGH +L DI +G E D ARVL D ++ARV+ D+ LAK A++P+INGL+D HP QI+AD LT+ EH L+G + ++GDGNN++HS ++ A+ H A PKG+ Sbjct: 31 LQNKVQLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGY 223
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_SHEEP (Ornithine carbamoyltransferase, mitochondrial OS=Ovis aries GN=OTC PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.318e-36 Identity = 79/183 (43.17%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + +F I +L +A++K +K +GK++ MIF K S RTR+S ETGF+LLGGH +L DI +G E D ARVL D ++ARV+ D+ LAK A++PVINGL+D HP QI+AD LT+ EH L+G + ++GDGNN++HS ++ A+ H A PKG+ Sbjct: 7 DLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLETLAKEASIPVINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGY 189
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_SYNPX (Ornithine carbamoyltransferase OS=Synechococcus sp. (strain WH8102) GN=argF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.334e-36 Identity = 80/183 (43.72%), Postives = 109/183 (59.56%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D+L +D +LD AA+ LKSGDR + + + +IF K S RTRVSF+ + LGG + L P Q+G+ E D ARVL RY D++ R F Q+++D A +ATVPVIN LTD HPCQ +AD LT+ E G L G + Y+GDGNNV HS +L +++ + CP+GF Sbjct: 19 DYLSSADCSAEETSAVLDLAAQ----LKSGDRR-IDLGNRVLGLIFTKASTRTRVSFQVAMARLGGQTVDLNPKVTQLGRGEPLEDTARVLSRYCDVLAVRTFAQQELVDYAHWATVPVINALTDLEHPCQSLADFLTMREAHGDLPGQTLAYIGDGNNVAHSLMLCGALLGVNVRIGCPQGF 196
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METST (Ornithine carbamoyltransferase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=argF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.334e-36 Identity = 75/162 (46.30%), Postives = 104/162 (64.20%), Query Frame = 1 Query: 322 EVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 E+ + LKSG+ + P K + MIF K S RTRVSFE G LGG +YL D+Q+ + E D ARVL R+ D IM R H+++ +L +++T+P+I+GLTD HPCQI AD LTI E+ G K+V++GDGNNV +S LL A+ + ACP+G+ Sbjct: 19 EIASGLKSGEITEKPLTNKYIGMIFEKSSTRTRVSFEVGIHQLGGTPLYLSSKDLQLNRGEPIEDTARVLSRFLDGIMIRAKKHENVEELVQYSTIPIISGLTDKEHPCQIFADLLTIKEYKGDFNDKKIVFIGDGNNVCNSLLLAAAYVGMDMTVACPEGY 180
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_CUPTR (Ornithine carbamoyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=arcB PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.334e-36 Identity = 82/183 (44.81%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILD-LAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +L SDF +LDRA +KA K+ + ++ P +T++MIF K S RTR+SFE G LGGHA++L D Q+G+ E DAA+V+ R DIIM R FG QDI+D A + VPVINGLT+ HPCQ++AD T IE G + G V ++GD NN+ ++W+ A + F F + P G+ Sbjct: 9 YLQFSDFTPDEYEYLLDRARILKAKFKNYE-TWHPLHDRTLAMIFEKNSTRTRLSFEAGIHQLGGHAVFLNTRDSQLGRGEPIEDAAQVISRMVDIIMIRTFG-QDIIDRFAAHSRVPVINGLTNEYHPCQVLADVFTYIEQRGSIRGKTVAWIGDANNMAYTWIQAAERLGFTFHFSAPPGY 189
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_BRAJA (Ornithine carbamoyltransferase OS=Bradyrhizobium japonicum GN=argF PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.334e-36 Identity = 82/179 (45.81%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACP 798 FL I++ + + +LD ++ +KA K+ + P +GKT++MIF +PS RTRVSF+ LGG I L ++Q+G+ E D ARVL RY D IM R+ H +L+LA ATVPVINGLT +HPCQ+MAD LT EH G +EG V + GD NNV+ SW A F A P Sbjct: 8 FLDINELPLSELKSMLDASSAMKAKQKA-HQPVRPLEGKTLAMIFERPSTRTRVSFDVAMRQLGGEPIMLTGAEMQLGRGETIADTARVLSRYVDAIMIRILNHDALLELAANATVPVINGLTRRSHPCQVMADLLTYQEHRGPIEGRTVAWTGDDNNVLASWAHAAERFKFQLNVATP 185
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_RALME (Ornithine carbamoyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=argF PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.660e-36 Identity = 79/182 (43.41%), Postives = 111/182 (60.99%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +L SD +LDRA +KA K+ + ++ P +T++MIF K S RTR+SFE G LGGHA++L D Q+G+ E DAA+V+ R DIIM R FG + I AK + VPVINGLT+ HPCQ++AD T IE G + G V ++GD NN+ ++W+ A + F F + P G+ Sbjct: 9 YLQFSDLSADEYEYLLDRARILKAKFKNYE-TWHPLHDRTLAMIFEKNSTRTRLSFEAGIHQLGGHAVFLNTRDSQLGRGEPIEDAAQVISRMVDIIMIRTFGQEIIDRFAKHSRVPVINGLTNEYHPCQVLADVFTYIEQRGTIAGKTVAWIGDANNMAYTWIQAAERLDFTFHFSAPPGY 189 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |