FC878133

Overview
NameFC878133
Unique NameFC878133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 3
Query:  183 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 728
            F  +  K  K Y S  E +RR TIF+ NLR    R   + S   G+ +F+DL+  E+     G   R  R       +    T+D   LP   DWR +GAV  VKDQG C SCW+FST GA+EG N + TG+LV+LSEQ L++C+ E         ++GC GG + +A+E+ +  GGL  + DYPY
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPY 232          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 65/148 (43.92%), Postives = 86/148 (58.11%), Query Frame = 3
Query:  429 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            +DLP   DWRE GAV PVK+QG CGSCW+FST  A+EG N + TG L+SLSEQQLVDC          + + GC GG MN AF++ +  GG+  EE YPY G D    C    +    S+ ++  V    +Q     V N P++V ++
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQD--GICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMD 137          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.680e-28
Identity = 83/246 (33.74%), Postives = 124/246 (50.41%), Query Frame = 3
Query:  159 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDA---DQAPILPTND-----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            DL  ++  F  F  K+NK Y S EE   +   FK NL+    +      A   + ++SDL      R   G R  L+    A    +  ++   D     LP   DWR+K  V PVK+Q  CGSCW+FST   +E    +   K ++LSEQ LV+CD         + ++GC GGLM+ A E  L+ GG++  E+ PY G D    CK    +++ S +   V+  +E+++   LV NGP++VAI+
Sbjct:   24 DLNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFD--GVCKKSPFELSISGSRRYVLQ-NENKLRELLVVNGPISVAID 257          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.194e-28
Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 3
Query:  435 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            +P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVD             + GCNGGLM++AF+Y  + GGL  EE YPY  TD   +C +     AA    F  +   E  +   +   GP++VAI+
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDT--SCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAID 137          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.383e-28
Identity = 83/233 (35.62%), Postives = 115/233 (49.36%), Query Frame = 3
Query:  192 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKL--RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            ++ K  KAY   EE  RR  +++ N +             H  T     F DLT  EF +   G RR+   R+    D   +     +P   DWR  G V PVK+QG C S W+FS TG+LEG  F  TG+LV LSEQ L+DC          +    C+GG M +AF+Y    GGL  EE YPY G   G  C++     AA+V +F  +   E+ +   + K GP++VA++
Sbjct:   32 WRTKHGKAYNVNEERLRR-AVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLY----VPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGP--GRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVD 250          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.422e-27
Identity = 86/243 (35.39%), Postives = 119/243 (48.97%), Query Frame = 3
Query:  156 NDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGV--TQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            +D +   + ++ +K K+N+ Y SQ +   RF +F  NL      Q    SAT+ +   QF+D++  EF  TYL LR       +A  A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   K   LSEQ LVDC    D E       GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F+   +D     A  ++   ++VA++
Sbjct:   17 SDEIDTANLYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRVPKTAKLNASNANFQYKG---AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFT--DIDSCDELAQAIQERTVSVAVD 244          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.168e-27
Identity = 79/232 (34.05%), Postives = 114/232 (49.14%), Query Frame = 3
Query:  192 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRR-KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            ++ K  K Y   EE  +R  +++ N +             H  T     F DLT  EF +   G +R K++          L    +P   DWR+ G V PVK+QG C S W+FS TG+LEG  F  T +L+ LSEQ L+DC          +   GC+GG M  AF+Y    GGL  EE YPY G  +G  C++     AA+V +F  +   E+ +   + K GP++VA++
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLY---VPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG--QGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVD 250          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.137e-27
Identity = 81/247 (32.79%), Postives = 117/247 (47.37%), Query Frame = 3
Query:  150 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPK---DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK-FDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 869
            + +DL   E    LF     K NK Y S +E   RF IF+ NL       K + S   G+  F+DL+  EF++ Y+G   +        D +        + P   DWR KGAV PVK+QG+CGSCW+FST   +EG N + TG L+ LSEQ+LVDCD             GC GG   ++ +Y     G+   + YPY    + + C+  DK      +  +  V  + +      + N PL+V +
Sbjct:   34 SQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVAN-NGVHTSKVYPYQA--KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLV 268          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.137e-27
Identity = 82/238 (34.45%), Postives = 119/238 (50.00%), Query Frame = 3
Query:  192 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDP----SATHGVTQFSDLTPAEFRRTYLGLRRKLR------LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV-KNGPLAVAIN 872
            +K+ +NK Y   ++  RR  I++ N++              + T G+ QF+D+T  EF+  YL    +        +P +A+   +      P   DWRE G V  VKDQG+CGSCW+FSTTG +EG         +S SEQQLVDC            ++GC+GGLM +A++Y LK  GL  E  YPYT  +    C+++K    A V  +  V    +    NLV    P AVA++
Sbjct:   24 WKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAV------PDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQY-LKQFGLETESSYPYTAVE--GQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVD 244          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.403e-27
Identity = 78/231 (33.77%), Postives = 111/231 (48.05%), Query Frame = 3
Query:  192 FKKKFNKAYASQEEHDRRFTIFKANLRRAARR----QKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF-DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 869
            FKK   + Y S  E   RF IF+  LR+ A      +  + +    + +FSD+T  EFR   L      R   +  +   L     P   DWR KG V PV++QG CGSCW+ ST  A+E  + + +G  V LS QQLVDC            + GCNGG   + FEY +K  GL  + DYPY+G +    CK  DKS+    +  +  V+  E  +   +   GP++  +
Sbjct:   26 FKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFR-DMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYG-------NHGCNGGFAVNGFEY-VKDNGLESDADYPYSGKE--DKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVV 245          
The following BLAST results are available for this feature:
BLAST of FC878133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CPR4_ARATH1.286e-2840.32Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPGP2_ZINOF1.286e-2843.92Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATV_GVCP1.680e-2833.74Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATL1_SHEEP2.194e-2846.58Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
TEST2_MOUSE6.383e-2835.62Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATL2_PARTE1.422e-2735.39Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
TEST2_RAT3.168e-2734.05Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
PAPA2_CARPA4.137e-2732.79Chymopapain OS=Carica papaya PE=1 SV=2[more]
CATLL_FASHE4.137e-2734.45Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATLL_PHACE5.403e-2733.77Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA30BA09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA30BA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878133 ID=FC878133; Name=FC878133; organism=Citrus clementina; type=EST; length=873bp
AAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTC
GTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGATCAGCTGAT
CAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCA
CCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTATTCAAGAAG
AAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCGTAGGTTCAC
TATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACC
CGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACTCCGGCCGAG
TTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGA
TGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTG
ATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGC
GGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTT
CCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATT
GCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGC
AATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGG
GCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACG
CCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCCAACTTCAGT
GTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCTTGTGAAAAATGG
TCCCCTTGCAGTGGCCATCAATG
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