FC878143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.429e-57 Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 MSFRS+++++RD FGS+SR S R + +Q SCWA LPPELL +V+ R+EESE WP+R+ VVACA VCRSWR + KEIVR PE GKLTFP+SLKQPG RDGT++CFI+R+++ TY+L+ Sbjct: 1 MSFRSLIQEMRDEFGSISRHSLRSRSHRGGGGAPRVAAVGPAEA-AAMQQSCWAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLY 139 HSP 2 Score: 88.9669 bits (219), Expect = 5.429e-57 Identity = 38/68 (55.88%), Postives = 55/68 (80.88%), Query Frame = 2 Query: 635 LVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPS 838 L ++GKFLL+A++ R+ TCT+Y+IS+D ++S+ S+TYIGKLRSNFLGTKF +YD PP+ A ++ S Sbjct: 146 LADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKS 213
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.985e-54 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFR--LTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 MSFRS++++V+ G++SRR F R ++ +V++ SCW LPPELL +V+ R+EESE WP R+ VVACA VCRSWR + +EIVR+PE G LTFP+SLKQPG RD ++CFI R+++ TY+L+ Sbjct: 1 MSFRSVIQEVKGEIGAISRRGFRSRPGRVRRVAAAAEEPPDESSAAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLY 142 HSP 2 Score: 88.9669 bits (219), Expect = 6.985e-54 Identity = 38/60 (63.33%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 635 LVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPH 814 L ++GKFLL+A++ RRTTCTEY+IS+D ++IS+ + +Y+GKLRSNFLGTKF IYD PP+ Sbjct: 149 LTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPY 208
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.470e-53 Identity = 76/143 (53.15%), Postives = 94/143 (65.73%), Query Frame = 3 Query: 195 MSFRSIVRD---VRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 MS +SI+RD VRD G +S+RS+ N I S WASLPPELL D+I R+EESE++WPAR VV+CA+VC+SWR + EIVR PE CGKLTFP+SLKQPG RD IQCFIKR+++ TY L+ Sbjct: 1 MSLKSILRDLKEVRDGLGGISKRSWSKSSHIAPDQTTPPLDN--------IPQSPWASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGPRDSPIQCFIKRNRATATYILY 135 HSP 2 Score: 86.2705 bits (212), Expect = 4.470e-53 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 2 Query: 641 ENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPS 838 EN K LL+A+R RR TCT+++IS+ A N SRSSSTY+GKLRS FLGTKF IYD Q ++A P+ Sbjct: 144 ENDKLLLAARRIRRATCTDFIISLSAKNFSRSSSTYVGKLRSGFLGTKFTIYDNQTASSTAQAQPN 209
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.960e-51 Identity = 74/159 (46.54%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 195 MSFRSIVRDVR---DSFGSLSRRSFDFRL------------TXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MS +SIVR++R D GS+SRR+ D R L Q Q WA+LPPELL DVI+R+E SE++WPAR+ VVACAAVCRSWR + KE+V++ E CG++TFP+SLKQPG R+ +QCF++RD++ TY L+ L+ Sbjct: 1 MSLKSIVRELREMRDGIGSMSRRAADGRAGGGRGGSRHSWPVLWSEQQQPPQQQQLQRQEHQQQQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLS 159 HSP 2 Score: 80.8777 bits (198), Expect = 8.960e-51 Identity = 39/67 (58.21%), Postives = 53/67 (79.10%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPP 811 +L LSP+L EN K LL+A++ RR T T +VIS+ +++ S SSSTY+GKL+ NFLGTKF I+D+QPP Sbjct: 155 YLGLSPSLHGENDKLLLAARKIRRATRTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPP 221
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.340e-48 Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 336 IQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 + S W LPPELL D+I+R+E +S WP R+ VVACA+VC+SWR M KE+V+ PE G +TFP+SL+QPG RD IQCFIKR+++ Y L+ L+ Sbjct: 64 LNQSIWVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLS 160 HSP 2 Score: 90.1225 bits (222), Expect = 2.340e-48 Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPS 838 +L LSPAL + K LLSAKR RR T E+V+S+ ++ SRSSS YIGKLRSNFLGTKF +Y+ QPP + + PS Sbjct: 156 YLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPPPFNRKLPPS 231
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP9_ARATH (Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.120e-41 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 351 WASLPPELLCDVIKRLEESESS-WPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 W+ LP ELL +++ R+E + WP+R++VVACA VCRSWR + KEIV PEF KLTFP+SLKQ G RD +QCFIKR+++ +YHL+ Sbjct: 33 WSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLY 121 HSP 2 Score: 77.0258 bits (188), Expect = 4.120e-41 Identity = 31/55 (56.36%), Postives = 47/55 (85.45%), Query Frame = 2 Query: 635 LVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYD 799 L +NGKFLL+A + +R TCT+Y+IS+ +D+IS+ S+ Y+G++RSNFLGTKF ++D Sbjct: 128 LTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTKFTVFD 182
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.017e-40 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 351 WASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVL 623 W+ L PELL ++++R++ WP R+ VVACA VCR WR +VR P CG++TFP SLKQPG RD + CFI+R+K N T++L+ L Sbjct: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSL 142 HSP 2 Score: 81.6481 bits (200), Expect = 2.017e-40 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSA 823 +L L+ AL + GKFLL+A+R R TEY+IS D D++ S++Y+GKLRS+FLGTKFIIYD+QPP+ A Sbjct: 139 YLSLTQAL-TDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGA 208
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP1_ORYSJ (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-39 Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 339 QNSCWASLPPELLCDVIKRLEESESS-WPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 Q WA L PEL+ +V++R+E S WPARK VV+CA VCR WR +VR P GK+TFP SLKQPG R+ +QCFIKR+K N T++L+ Sbjct: 30 QEERWARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFPSSLKQPGPREFPMQCFIKRNKKNSTFYLY 122 HSP 2 Score: 78.9518 bits (193), Expect = 1.286e-39 Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 638 VENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPS 838 V+ GKFL++A+R RR TEY++S+DAD++S+ S+ Y+GKLRS+F GT F IYD++PP+ A + S Sbjct: 130 VDKGKFLMAARRFRRGPHTEYIVSLDADDLSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSS 196
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP7_ARATH (Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.067e-38 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 342 NSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVL 623 +S W+++ PELL ++I+R+EE+E WP R+ VV CA V + WR + + RS GK+TFP LK PG RD + QC IKR+K T++L+ L Sbjct: 41 SSSWSAMLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDFSNQCLIKRNKKTSTFYLYLAL 134 HSP 2 Score: 85.8853 bits (211), Expect = 1.067e-38 Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSA 823 +L L+P+ + GKFLL+A+R R TEY+IS+DAD+ S+ S+ Y+GKLRS+FLGT F +YD+QPPH A Sbjct: 131 YLALTPSF-TDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVGKLRSDFLGTNFTVYDSQPPHNGA 200
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP11_ARATH (Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.810e-38 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 3 Query: 339 QNSCWASLPPELLCDVIKRLEESESS-WPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 Q+ W+ +P ELL +++ R+E ++ WP+R+ VVACA VCR WR + E V PE KLTFP+SLKQPG RD +QCFIKR++ +YHL+ Sbjct: 35 QDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLY 127 HSP 2 Score: 74.7146 bits (182), Expect = 1.810e-38 Identity = 31/55 (56.36%), Postives = 46/55 (83.64%), Query Frame = 2 Query: 635 LVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYD 799 L ++GKFLL+A + + TTCT+Y+IS+ +D++SR S Y+GK+RSNFLGTKF ++D Sbjct: 134 LTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFD 188 The following BLAST results are available for this feature:
BLAST of FC878143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878143 ID=FC878143; Name=FC878143; organism=Citrus clementina; type=EST; length=848bpback to top |