FC878148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.637e-16 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 119 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 385 C+ C TA +FCRAD+A LC+ CD +H+AN L+ +H R +C+ C + P V C D LC CD D+H + + HER V F Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.033e-15 Identity = 36/91 (39.56%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 113 KLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 385 +LCD C S+ A V+C+ADSA LC+ CD ++H AN+L ++H R +C+ C ++P+ + C+ + + LC CD H+A+ + H R P F Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.349e-15 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 2 Query: 119 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 385 CD C TA +FCRAD+A LC+ CD ++H AN L+ +H R +C+ C P V C D LC CD D+H + ++ H R V F Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.925e-15 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 116 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSA-NPLARRHERVPVTPFYDSVDSSA 409 +CD C + V+CR+D+A LC++CD +H+AN L+ RH+R VCE C PA V C + +LC CD H N H + Y SSA Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSA 102
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 116 LCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHS 337 +CD C + V+CR+D+A LC++CD +H+AN L+ RH+R VCE C PA V C + +LC CD H+ Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHN 77
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 89 VALREMASKLCDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARR 358 + + E ++C+ CK+ A V+C AD+A LC+ CD K+H+AN L+ RH R +C+ C+ P V C LC C+ H R Sbjct: 4 IIIIENMERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHR 93
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL11_ARATH (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana GN=COL11 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.823e-12 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 2 Query: 119 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARR 358 CD C + A ++C++DSA LC+NCD +H+AN L+ RH R +CE C P V C + +LC C + L R Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGCQWTASNCTGLGHR 84
BLAST of FC878148 vs. ExPASy Swiss-Prot
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana GN=COL12 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 2 Query: 119 CDSCKSATATVFCRADSAFLCVNCDTKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 385 CD C ++ A ++C++D A LC+NCD +H+AN L+ RH R +CE C PA + C + + C C H +N H + PF Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEKVSYCQGC--HWHESNCSELGHRVQSLNPF 91 The following BLAST results are available for this feature:
BLAST of FC878148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878148 ID=FC878148; Name=FC878148; organism=Citrus clementina; type=EST; length=913bpback to top |