FC878149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: TOP6A_HALMA (Type II DNA topoisomerase VI subunit A OS=Haloarcula marismortui GN=top6A PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.387e-24 Identity = 76/262 (29.01%), Postives = 128/262 (48.85%), Query Frame = 1 Query: 106 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLTF---SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP 855 +P+R SN ++ + V D+ + R ++S K V + + Q + T R+L+Y D F Q +S+ +++D+ + R ++ E G V+G L ++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F + + ++V GQP ATR ++++ EL LPV D DP+ +I GS ++ S L TP+ +++GIRP D+ +Y++P Sbjct: 39 IPTRTKSNIVFDEDEQVWVYGDRNSTRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTLRELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYELP 300
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: SPO11_CAEEL (Meiotic recombination protein spo-11 OS=Caenorhabditis elegans GN=spo-11 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.260e-23 Identity = 68/245 (27.76%), Postives = 128/245 (52.24%), Query Frame = 1 Query: 157 IVLKDKTTLRPFASLSTVRKSTITVKILSLIHQ---LCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLTFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPC-IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 876 + L+ T+ F T ++ + L +HQ L + TKR+L+Y ++ +Q D+ + + +L +R++LN+++ +G++ G +TF +N +ID + + + ++ S+A FIL+VEKD + +L ++ F FP I+ T+KG PD+ATR L+ + + K P+ L D+DP+G++I Y G + P I+W+G+ P+D ++ I + LP+ Sbjct: 69 LTLRISTSKSHFCLRYTAKRKGKLDRDLHCLHQVYDLLENDKRSTKRELYYEHKAVYGNQKYLDSSIKSICELLNESRANLNILSCGRGIIRGAITFLVENVGVIDARVQ----EVLITDALLFSNIISEADFILVVEKDTTFQKLMDENFQAMFPRGILATSKGYPDIATRNVLKMLSEKRKFPIYGLFDADPHGIEIYLTYKYGPTKEFAEGRGAFVPTIEWIGLFPTDFHRFTIDQSQCLPL 309
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: REC12_SCHPO (Meiotic recombination protein rec12 OS=Schizosaccharomyces pombe GN=rec12 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.646e-23 Identity = 67/185 (36.22%), Postives = 107/185 (57.84%), Query Frame = 1 Query: 232 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLTFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYD 780 ++L +H+ + + +TKRD++Y DV LF+ QT D +L D++ +GC+RS LNV A+ KG+V G + + +NG +I T K + + R+ + S A ++L++EK+A + L E+ + IIVTAKG PD+ TR FL K+ L + D DP+GL I S + GS S++ Sbjct: 76 RVLDCVHEAVISDTVITKRDIYYRDVDLFKRQTVVDELLGDISNTIGCSRSDLNVEASAKGLVFGSIHIALENGTVITAT------KPLLISHHRISSITSTAKWVLVIEKEAVFQTLTEEALAD---TIIVTAKGFPDLMTRKFLVKLAKALPDAKFFGIFDWDPHGLCIYSCFKYGSNAYSHE 251
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: TOP6A_METAC (Type II DNA topoisomerase VI subunit A OS=Methanosarcina acetivorans GN=top6A PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.149e-23 Identity = 78/266 (29.32%), Postives = 132/266 (49.62%), Query Frame = 1 Query: 97 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS----LIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRLTFSD----NGDMIDCTK-MGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 852 S +PSR +N Y E D V D+ + R S TV+ + +K LI++ N T R+L+Y D F++Q +SD +++D+ + R ++ E G + G + S+ I C K +G GG IP N++ + DA I+ +E Y RL E+ F + I+V KGQP +TR +++M EL++PV D DP+ +I + G+ ++ S + TP ++LG++PSD+ +Y++ Sbjct: 42 SVSLPSRTKANIEYSDESDVWVYGDRESER---SAKTVKGAFQLLKTTYATDFLINEHLAHNRGSTLRELYYISEGWDYAKFKEQAESDRLIEDLELLTSLQREYFHMRPEEDGATMFGPIEISELTKRGARNIHCQKDVGEGGYQIPFNVENIEFKNHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELEIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAARFLGLQPSDIVEYEL 304
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: TOP6A_METBF (Type 2 DNA topoisomerase 6 subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=top6A PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.053e-22 Identity = 77/268 (28.73%), Postives = 133/268 (49.63%), Query Frame = 1 Query: 97 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR------KSTITVKILSLIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRLTFSDNGDM----IDCTK-MGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 852 S +PSR SN Y E D V + + R S TV+ K+T + L I++ ++ T R+L+Y + F++Q +SD +++D+ + R ++ E G + G + ++ + I C K +G GG IP N++ + DA I+ +E Y RL E+ F + I+V KGQP +TR +++M EL +PV D DP+ +I + G+ ++ S + TP K+LG++PSD+ +Y++ Sbjct: 38 SISLPSRTKSNLEYSNESDVWVYGGRESER---SAKTVKGAFQLLKTTYATEFL--INEHLAQSRGSTLRELYYISEGWEAAKFKEQAESDRLIEDLELLTNLQREYFHMRPEEDGATMFGPIEITEQTNRGERNIHCQKDVGEGGYQIPFNVENIEFKAHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYEL 300
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: SPO11_NOSCE (Probable meiosis-specific protein SPO11 homolog OS=Nosema ceranae (strain BRL01) GN=SPO11 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12 Identity = 52/204 (25.49%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 229 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLTFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLD 840 +K IH N KR+++Y V +F+ Q+ D ++ D L CT+S L + KGV G +TF N ++ + + G ++ P+++++ ++ L++EKD + + + N + + KG P T L + K L + + D DPYGL+I + Y P IK +GI D++ Sbjct: 30 LKFYEQIHLGLTLNKIKNKREIYYNSVSIFKKQSIVDMLIKDTCNKLKCTQSDLLISTTLKGVFYGNITFYKNNKLV---HVNLKGTSLIPDMNQIDRIEYTQKKCLIIEKDTIFSKTVREYISN--DILFICGKGYPCRNTLLLVNK----LNIRKYGIFDFDPYGLEICTKY----------------PSIKKIGIDIKDIN 208
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: SPO11_YEAST (Meiosis-specific protein SPO11 OS=Saccharomyces cerevisiae GN=SPO11 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11 Identity = 54/205 (26.34%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 208 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLTFSDNGDMIDCTKMGMGGKA--IPPNIDRVGDMKSDAMF---------ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 777 +++ I + +L ++ + + T RD+FY++V+LFQ Q LD + + R SLN+I A+KG+V +++ C K P + + DA+ I++VEK+A + +L + +++T KG PD TRLFL+K++ +L D+DPYG+ I Y ++ +Y Sbjct: 105 LKRCAILLNLLKVVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRKSLNIIPAQKGLVYSPFPIDIYDNILTCENEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTTSMCNIVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCSIFTDADPYGISIALNYTHSNERNAY 309
BLAST of FC878149 vs. ExPASy Swiss-Prot
Match: SPO11_ENCCU (Probable meiosis-specific protein SPO11 homolog OS=Encephalitozoon cuniculi GN=SPO11 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11 Identity = 56/200 (28.00%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 229 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLTFSDNG--DMIDCTKMGMGGKAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPC----IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIK 810 +++ +I ++ I +R++FY DV +F+ Q+ ++ +A L ++ L V KG+ +GRL F + M++ + G G + P++ + ++ D ++VEKD R+A + R C + V KG P T L L+ +E K V L D DP+G+ I +Y GSK TPDI+ Sbjct: 34 LRLYEIIIEMQELGITRNEREIFYMDVNVFRTQSVVRRLVSSIASELQISKHDLGVRNTLKGIFIGRLGFVRHHGLGMVEMSSKG-GCPQLIPDMSDIAEVLCDYKKTVVVEKDTVLQRIASE--IEREKCLEEILFVCGKGYPCKNTVLLLK--MIEHKTAVAGLFDLDPFGIHIFCIYKYGSKE---------TPDIR 219 The following BLAST results are available for this feature:
BLAST of FC878149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878149 ID=FC878149; Name=FC878149; organism=Citrus clementina; type=EST; length=877bpback to top |