FC878161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.428e-43 Identity = 102/204 (50.00%), Postives = 127/204 (62.25%), Query Frame = 3 Query: 288 TTKKNSNSIDVNKGYEESAAAGVAEYQILNRQA----SPHSAVSNSFSSGR--VVKRERDLXXXXXXXXXXXXXRASDEDEDGVN---ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM-PAATLTMCLSCERI 869 T ++NS++ +G+ + A L +A SP+SAVS+ + R V R D +DEDG N +RKKLRL+K+Q+ +LEE+FK+HSTLNPKQK ALA+QLNLR RQVEVWFQNRRARTKLKQTEVDCE+LK+CC+ LT+ENRRL LYMHM P TLTMC SCER+ Sbjct: 73 TAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERV 276
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.685e-42 Identity = 107/214 (50.00%), Postives = 132/214 (61.68%), Query Frame = 3 Query: 288 TTKKNSNSIDVNKGYEESAAAGVAEYQILNRQA---SPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXX-----RAS------DEDEDGV-----NARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM-PAATLTMCLSCERI 869 ++++NS+ +G + + A + + A SP+S VS S SG+ K ER+L RAS +DEDG ++RKKLRL+KEQ+ +LEE+FK+HSTLNPKQK ALA+QLNLR RQVEVWFQNRRARTKLKQTEVDCE+LK+CCE LTDENRRL LYMHM P TLTMC SCER+ Sbjct: 65 SSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVS-SVMSGK--KSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERV 275
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.506e-42 Identity = 87/131 (66.41%), Postives = 101/131 (77.10%), Query Frame = 3 Query: 495 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM------PAATLTMCLSCERI 869 A+ +D++G N+RKKLRL+KEQSALLE+ FK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLT+ENRRLH M PAATL++C SCER+ Sbjct: 82 AAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERL 212
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.506e-42 Identity = 87/131 (66.41%), Postives = 101/131 (77.10%), Query Frame = 3 Query: 495 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM------PAATLTMCLSCERI 869 A+ +D++G N+RKKLRL+KEQSALLE+ FK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLT+ENRRLH M PAATL++C SCER+ Sbjct: 82 AAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERL 212
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.636e-41 Identity = 84/133 (63.16%), Postives = 102/133 (76.69%), Query Frame = 3 Query: 495 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----XXXXXXXXXXXXXPLYMH----MPAATLTMCLSCERI 869 ASD+++ G +RKKLRL+K+Q+A+LE++FK+H+TLNPKQK ALARQLNL+PRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLTDENRRLH P +++ P TLTMC SCER+ Sbjct: 145 ASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERV 277
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 8.636e-41 Identity = 84/133 (63.16%), Postives = 102/133 (76.69%), Query Frame = 3 Query: 495 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----XXXXXXXXXXXXXPLYMH----MPAATLTMCLSCERI 869 ASD+++ G +RKKLRL+K+Q+A+LE++FK+H+TLNPKQK ALARQLNL+PRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLTDENRRLH P +++ P TLTMC SCER+ Sbjct: 145 ASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERV 277
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.513e-40 Identity = 111/271 (40.96%), Postives = 140/271 (51.66%), Query Frame = 3 Query: 87 MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSL------GLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDG-VNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM-PAATLTMCLSCERIGG 875 MG +D GL L LGF+ N N ++ N+ Q +LP F+P+ L P + E T + NS G + S G++ + + +S G SDE+EDG +RKKLRL+K+QSA LEE+FK+H+TLNPKQK ALA++LNL RQVEVWFQNRRARTKLKQTEVDCE+LK+C E LT+ENRRL Y M P TL MC SCER+GG Sbjct: 3 MGKED---LGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQ-RLPWNQTFDPTSDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISG-KRSEREGISGTGVGSGDDHDEITPDRGYSRG-----------------------TSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCERVGG 245
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.286e-40 Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 3 Query: 498 SDEDEDGVN---ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXP-LYMHM-PAATLTMCLSCERI 869 SDE++ G +RKKLRL+K+QSA+LE+SF++H TLNP+QK LA+QL LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P LYM+M P TLTMC SCER+ Sbjct: 68 SDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCERV 196
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.286e-40 Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 3 Query: 498 SDEDEDGVN---ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXP-LYMHM-PAATLTMCLSCERI 869 SDE++ G +RKKLRL+K+QSA+LE+SF++H TLNP+QK LA+QL LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P LYM+M P TLTMC SCER+ Sbjct: 68 SDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCERV 196
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.600e-37 Identity = 90/173 (52.02%), Postives = 111/173 (64.16%), Query Frame = 3 Query: 384 ASPHSAVSNSFSSGR-VVKRERDLXXXXXXXXXXXXXRAS-----DEDED--GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM-PAATLTMCLSCERIGG 875 +SP+S +S++ S R +RE R+S DE+ED G RKKLRL+K+QSA+LE++FK+H+TLNPKQK ALA++L L RQVEVWFQNRRARTKLKQTEVDCE+LK+C E LT+ENRRL LY M P TL MC SCER+ G Sbjct: 78 SSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCERVAG 250 The following BLAST results are available for this feature:
BLAST of FC878161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878161 ID=FC878161; Name=FC878161; organism=Citrus clementina; type=EST; length=875bpback to top |