FC878161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.201e-36 Identity = 107/238 (44.96%), Postives = 128/238 (53.78%), Query Frame = 3 Query: 237 SLSLGLPGEIYPEAATATTKKNS-----------NSI--DVNKGYEESAAA-----GVAEYQILNRQAS--PHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYM-------HMPAATLTMCLSCERI 869 SL LGL + ++T TT NSI DV + + AA GV ++ +AS P SA + S +SG KRER+L D+ DG RKKLRL+K+Q+A+LEE FK HSTLNPKQK ALA +L LRPRQVEVWFQNRRARTKLKQTEVDCE+LK+ CE L DEN+RL AATLTMC SC R+ Sbjct: 7 SLGLGLASQGSLTSSTTTTSSPGAGSSSPWAAALNSIVGDVRRDQAAAHAAAAVGVGVGGEEMYQGRASTSPDSAAALSSASG---KRERELERSGSGVD-------DDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRV 234
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.201e-36 Identity = 107/238 (44.96%), Postives = 128/238 (53.78%), Query Frame = 3 Query: 237 SLSLGLPGEIYPEAATATTKKNS-----------NSI--DVNKGYEESAAA-----GVAEYQILNRQAS--PHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYM-------HMPAATLTMCLSCERI 869 SL LGL + ++T TT NSI DV + + AA GV ++ +AS P SA + S +SG KRER+L D+ DG RKKLRL+K+Q+A+LEE FK HSTLNPKQK ALA +L LRPRQVEVWFQNRRARTKLKQTEVDCE+LK+ CE L DEN+RL AATLTMC SC R+ Sbjct: 7 SLGLGLASQGSLTSSTTTTSSPGAGSSSPWAAALNSIVGDVRRDQAAAHAAAAVGVGVGGEEMYQGRASTSPDSAAALSSASG---KRERELERSGSGVD-------DDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRV 234
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.755e-36 Identity = 84/133 (63.16%), Postives = 92/133 (69.17%), Query Frame = 3 Query: 495 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL-----HXXXXXXXXXXXXXPLY--MHMPAATLT---MCLSCE 863 A DED G ARKKLRL+KEQS+ LE+SFK+HSTL PKQK LA +LNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCE LT ENRRL PLY H+PAA T +C SCE Sbjct: 141 ADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.755e-36 Identity = 84/133 (63.16%), Postives = 92/133 (69.17%), Query Frame = 3 Query: 495 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL-----HXXXXXXXXXXXXXPLY--MHMPAATLT---MCLSCE 863 A DED G ARKKLRL+KEQS+ LE+SFK+HSTL PKQK LA +LNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCE LT ENRRL PLY H+PAA T +C SCE Sbjct: 141 ADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.151e-35 Identity = 77/122 (63.11%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 507 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH-XXXXXXXXXXXXXPLYMHMPAATLTMCLSCERI 869 D G ARKKLRL+K+Q+A+LEE FK H TL PKQK ALA+ LNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+ C+ L D+NRRLH P P TLTMCLSC+R+ Sbjct: 86 DVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKRV 207
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 4.151e-35 Identity = 77/122 (63.11%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 507 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH-XXXXXXXXXXXXXPLYMHMPAATLTMCLSCERI 869 D G ARKKLRL+K+Q+A+LEE FK H TL PKQK ALA+ LNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+ C+ L D+NRRLH P P TLTMCLSC+R+ Sbjct: 86 DVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKRV 207
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.477e-32 Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 501 DEDEDGVNAR---KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMH------MPAATLTMCLSCERI 869 DE+E GV KKLRL+KEQS LLEESF+ + TL PKQK+ALA +L LRPRQVEVWFQNRRARTKLKQTE++CE+LK+C +LT+ENRRL P + +PA+ LTMC CERI Sbjct: 65 DEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERI 196
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.477e-32 Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 501 DEDEDGVNAR---KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMH------MPAATLTMCLSCERI 869 DE+E GV KKLRL+KEQS LLEESF+ + TL PKQK+ALA +L LRPRQVEVWFQNRRARTKLKQTE++CE+LK+C +LT+ENRRL P + +PA+ LTMC CERI Sbjct: 65 DEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERI 196
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.203e-31 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 516 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH------XXXXXXXXXXXXXPLYMHMP----AATLTMCLSCERI 869 G RKKL+LTKEQS LLE+SF+ H+ L+ QK LARQL L+PRQVEVWFQNRRARTKLKQTEVDCEFLK+CCE+LT+EN++L LY+ P AA + +C SCE++ Sbjct: 110 GGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASPAAAAAGSQLYVQFPRAAAAAMVNVCPSCEKV 237
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.203e-31 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 516 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH------XXXXXXXXXXXXXPLYMHMP----AATLTMCLSCERI 869 G RKKL+LTKEQS LLE+SF+ H+ L+ QK LARQL L+PRQVEVWFQNRRARTKLKQTEVDCEFLK+CCE+LT+EN++L LY+ P AA + +C SCE++ Sbjct: 110 GGGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASAAAAAAGSQLYVQFPRAAAAAMVNVCPSCEKV 237 The following BLAST results are available for this feature:
BLAST of FC878161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878161 ID=FC878161; Name=FC878161; organism=Citrus clementina; type=EST; length=875bpback to top |