FC878161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30 Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 3 Query: 507 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCLSCERI 869 D+ RKKLRLT+EQS LLE+SF+Q+ TLNPKQK+ LA+ L LRPRQ+EVWFQNRRAR+KLKQTE++CE+LK+ +LT+EN RLH P ++ A++LTMC CER+ Sbjct: 131 DDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLH-REVEELRAMKVGPTTVN-SASSLTMCPRCERV 249
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.339e-25 Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 501 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAAT--LTMCLSCERI 869 D+ G RKKLRLTKEQS LLEESF Q+ TL PKQK+ LA L L RQVEVWFQNRRAR+KLK TE++CE+LK+ +L ++NRRL L P++T LTMC CER+ Sbjct: 59 DDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQ---------IEVEELRALKPSSTSALTMCPRCERV 174
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23 Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 507 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCLSC 860 DE+G + RKKLRLT EQ+ LLE+SF+ H+ L+ +KQ LA +L L RQVEVWFQNRRARTKLKQTE DC+ L++ C+ L +N RL P+ + AT +C SC Sbjct: 110 DEEGAS-RKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRDLAELRRSSSSPPV-SGLAVATPVVCPSC 225
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 45/87 (51.72%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCC-------ETLTDENRRLH 770 KK RLT EQ LLE SF++ + L P++K LAR+L L+PRQV VWFQNRRAR K KQ E D + LK + L +N RLH Sbjct: 77 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLH 163
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 45/87 (51.72%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCC-------ETLTDENRRLH 770 KK RLT EQ LLE SF++ + L P++K LAR+L L+PRQV VWFQNRRAR K KQ E D + LK + L +N RLH Sbjct: 79 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLH 165
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 501 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 +E D KK RLT EQ +LE SF++ + L P++K LAR+L + PRQV VWFQNRRAR K KQ E D + LK + L ++ L Sbjct: 76 EEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHAL 164
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 501 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 +E D KK RLT EQ +LE SF++ + L P++K LAR+L + PRQV VWFQNRRAR K KQ E D + LK + L ++ L Sbjct: 76 EEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHAL 164
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14 Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 3 Query: 495 ASDEDEDGVNA-------RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 AS+++EDG KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + L++ + EN L Sbjct: 85 ASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDAL 182
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.891e-14 Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 3 Query: 495 ASDEDEDGVNA-------RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 AS+++EDG KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + L++ + EN L Sbjct: 85 ASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDAL 182
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14 Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 501 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 746 D+ D KK RLT EQ LLE+SF+ + L P++K LA++L L+PRQV VWFQNRRAR K KQ E D + LK + L Sbjct: 58 DDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQL 139 The following BLAST results are available for this feature:
BLAST of FC878161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878161 ID=FC878161; Name=FC878161; organism=Citrus clementina; type=EST; length=875bpback to top |