FC878161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 501 DEDEDGVN-ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDEN 758 D +DG KK RL EQ LE++F+ + L P++K LAR L L+PRQ+ +WFQNRRAR K KQ E D + LK+ +TL EN Sbjct: 74 DYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAEN 160
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13 Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 507 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 D+ KK RL EQ LE+ F+ + L +K LAR L L+PRQ+ +WFQNRRAR+K KQ E D + LK+ E+L DEN L Sbjct: 63 DDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVL 149
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4) HSP 1 Score: 76.6406 bits (187), Expect = 2.005e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 498 SDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 SD+ + KK RL EQ LE+SF+ + L P++K LA+ L L+PRQ+ +WFQNRRAR K KQ E D + LKK + L +N L Sbjct: 104 SDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSL 193
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 510 EDGVNA-RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 +DG A KK RL EQ LE++F+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + LK+ + + EN L Sbjct: 122 DDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDAL 208
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 510 EDGVNA-RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 +DG A KK RL EQ LE++F+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + LK+ + + EN L Sbjct: 116 DDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDAL 202
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13 Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 498 SDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 SD+ + KK RL EQ LE+SF+ + L P++K LA+ L ++PRQ+ +WFQNRRAR K +Q E D + LKK E+L +N L Sbjct: 76 SDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASL 165
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.300e-12 Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 501 DEDED--------GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 D DED G KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR K KQ E D L++ + L ++ L Sbjct: 25 DVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDAL 121
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.300e-12 Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 501 DEDED--------GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL 767 D DED G KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR K KQ E D L++ + L ++ L Sbjct: 25 DVDEDMAMCGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDAL 121
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12 Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK 728 KK +LT Q LLEESF++ L P +K LA +L L+P QV VWFQNRRAR K KQ E DC+ LK Sbjct: 68 KKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLK 133
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 516 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 746 G KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR K KQ E D L+ ++L Sbjct: 46 GGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSL 122 The following BLAST results are available for this feature:
BLAST of FC878161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878161 ID=FC878161; Name=FC878161; organism=Citrus clementina; type=EST; length=875bpback to top |