FC878161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 516 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 746 G KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR K KQ E D L+ ++L Sbjct: 46 GGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSL 122
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 501 DEDEDGVNARKKLRLTKEQSALLEESFKQHST-LNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 746 DE A +K RLT EQ LE SF++ L P++K LAR+L + PRQV VWFQNRRAR K KQ E+D + L+ + L Sbjct: 72 DEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDEL 154
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12 Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 501 DEDEDGVNARKKLRLTKEQSALLEESFKQHST-LNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 746 DE A +K RLT EQ LE SF++ L P++K LAR+L + PRQV VWFQNRRAR K KQ E+D + L+ + L Sbjct: 12 DEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDEL 94
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.451e-11 Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH 770 KK RLT Q A LE SF++ L+ +K L+R+L L+PRQ+ VWFQNRRAR K KQ E + L++ + ++ E + LH Sbjct: 78 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLH 157
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK 728 KK RL EQ LE SF+ + L+P++K +AR L L PRQV VWFQNRRAR K KQ E D L+ Sbjct: 65 KKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALR 130
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK 728 KK RL EQ LE SF+ + L+P++K +AR L L PRQV VWFQNRRAR K KQ E D L+ Sbjct: 41 KKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALR 106
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11 Identity = 41/93 (44.09%), Postives = 50/93 (53.76%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE--------------VDCEFLKKCCETLTDENRRL 767 KK RL EQ LE SF + L+P +K +AR L L+PRQV VWFQNRRAR K KQ E DC+ L++ + L E R L Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIREL 164
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 525 ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL 746 A KK RL EQ LE++F+ + L P++K LA++L L+PRQV +WFQNRRAR K KQ E D LK + L Sbjct: 70 AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDAL 143
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11 Identity = 41/94 (43.62%), Postives = 50/94 (53.19%), Query Frame = 3 Query: 531 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE---------------VDCEFLKKCCETLTDENRRL 767 KK RL EQ LE SF + L+P +K +AR L L+PRQV VWFQNRRAR K KQ E DC+ L++ + L E R L Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIREL 165
BLAST of FC878161 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 3 Query: 525 ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK 728 + KK RL +Q LE++F+ + L P++K LA++L L+PRQV VWFQNRRAR K KQ E D LK Sbjct: 57 SEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLK 124 The following BLAST results are available for this feature:
BLAST of FC878161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878161 ID=FC878161; Name=FC878161; organism=Citrus clementina; type=EST; length=875bpback to top |