FC878164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_ARATH (Probable threonyl-tRNA synthetase, cytoplasmic OS=Arabidopsis thaliana GN=At1g17960 PE=2 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 3.875e-63 Identity = 115/169 (68.05%), Postives = 139/169 (82.25%), Query Frame = 3 Query: 96 MPSPNQVKDEEYLNKVIPKRISLFQSLQSEQQARLQSLPHDPIKITL-PDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDA-FYGDLGLNPDHFKSIDSE 596 M + + KDE YL+ VIPKRI LF+ +Q+EQ +LQS PHDPIKITL PDG KEG+RWETSPMDIA ISK LA +AL+S VN VLWDM RPLE DC L++F FDSD+GR+TFWHSSAHILGQA+EQ+YGCKLCIGPC R EGFYYD+ +YG+LGLN +HF +I+++ Sbjct: 1 MANNHHPKDEAYLSSVIPKRIRLFEEIQAEQLEQLQSRPHDPIKITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSALVSSVNHVLWDMNRPLEGDCSLEIFGFDSDQGRNTFWHSSAHILGQALEQEYGCKLCIGPCEPRDEGFYYDSLYYGELGLNDNHFPNIEAK 169
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC2_HUMAN (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.512e-62 Identity = 121/295 (41.02%), Postives = 176/295 (59.66%), Query Frame = 3 Query: 93 AMPSPNQVKDEEYLNK----------------VIPKRISLFQSLQSEQQARL-----QSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 A P P+Q +D++ K I +R+ LF+ L+ + Q L + + I + + DG +G+ W+T+P +A IS+ LA + +I+ VNG LWD+ RPLE D L+L TFD++E + +WHSSAHILG+A+E YG LC GP G FYYD F D ++ ++++ KEKQPFER+EV+++ LEMF N FK I+N+ T TVYRCGPL+DLC+GPH+ +T +K K SS YW GN + E+LQR+YGIS+PD K ++++ Sbjct: 98 AQPPPSQSQDKDMKKKKMKESEADSEVKHQPIFIKERLKLFEILKKDHQLLLAIYGKKGDTSNIITVRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAHILGEAMELYYGGHLCYGPPIENG--FYYDMFIEDRAVSSTELSALENICKAIIKEKQPFERLEVSKEILLEMFKYNKFKCRILNEKVNTATTTVYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYWEGNPEMETLQRIYGISFPDNKMMRDW 390
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_YEAST (Threonyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=THS1 PE=1 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 6.186e-61 Identity = 121/274 (44.16%), Postives = 172/274 (62.77%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCD----LKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDA----FYGDLGLNPDH------FKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 I +RI +F LQ E ++ S+P P+KI L DG+VKE WET+PMDIA+GISKSLA IS VNG LWD+ RP E + + L+L F+SDEG+ FWHSSAH+LG++ E G +C+GP T +GF+Y+ D+ +P+ F ++ A K+KQ FER+ ++++ L+MF + +K ++ +P TVYRCG L+DLC GPHIP+T +K F LK SS Y+ G+ +SLQRVYGIS+PDKK + +++ Sbjct: 49 IEERIEMFDRLQKEYNDKVASMPRVPLKIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQLWDLDRPFEGEANEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHLGAHICLGPPT--DDGFFYEMAVRDSMKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFHYSKYKTYLVQTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAFKLLKNSSCYFLGDATNDSLQRVYGISFPDKKLMDAHLK 320
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC2_BOVIN (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Bos taurus GN=TARSL2 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.826e-56 Identity = 111/294 (37.76%), Postives = 170/294 (57.82%), Query Frame = 3 Query: 93 AMPSPNQVKDEEYLNKVIP------------KRISLFQSLQSEQQARL-----QSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEG-FYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 A P P+Q +E+ ++ P +R+ F+ L+ + Q L + + I + + DG +G+ W+T+P +A IS+ LA +++ VNG LWD+ RPLE D ++L TF+ +E R +WHSSAH+LG+A+E YG LC C+ G+G F+YD + D ++ ++S KE+QPFER+EV+ L++F N FK I+ + A T TVYRCGPLV+LC+GPH+ +T +K K S AYW N + E LQRVYG+S+PD++ + + E Sbjct: 100 AQPPPSQSLEEDVKKEIDPDNEVKNPPNFMKERLKFFEILKKDHQLLLAIYEKKGDSSNVITVRVADGRTVKGEAWKTTPYQVAAEISQELAETTVVAKVNGELWDLDRPLEGDATVELLTFEDEEARAVYWHSSAHVLGEALELHYGGLLC---CSPPGDGSFHYDVYLEDRAVSSAELPVLESMCQAIIKEQQPFERLEVSTKVLLDLFKYNKFKCRILKEKVATPTTTVYRCGPLVELCKGPHVRHTGTIKVIKIFKNSLAYWADNPEMEMLQRVYGVSFPDEQRMAAWEE 390
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTM_RAT (Threonyl-tRNA synthetase, mitochondrial OS=Rattus norvegicus GN=Tars2 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.605e-51 Identity = 107/261 (41.00%), Postives = 151/261 (57.85%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDP---IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYG-DLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 + +R LF+ L + Q RL S+ IKI+LP+G + W T+P +AQ IS +LA A+ + VNG L+D+ RPLE DC L+ TFDS EG+ FW SSAH+LG A EQ G LC GP T GFY D F G + + +++ + QPF R+E +R Q ++F DN+FK+ +I + T TVY CG VDLC+GPH+ +T + L SSA WR ++ E+LQRV GIS+P + ++ + Sbjct: 37 LAERFGLFEELWTAQVKRLASMTQKKARTIKISLPEGQKVDAVAWNTTPYQLAQQISSTLADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWRSSAHVLGAAAEQHLGAVLCRGPSTE--SGFYLDFFLGKERTVRSTELPTLERICQEIITAAQPFRRLEASRGQLRQLFKDNHFKLHVIEEKVTGTTATVYGCGMSVDLCQGPHLRHTGQIGALKLLTNSSALWRSSEAPETLQRVSGISFPKAELLRNW 295
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTM_MOUSE (Threonyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Tars2 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.403e-51 Identity = 108/261 (41.38%), Postives = 150/261 (57.47%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDP---IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYG-DLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 + +R LF+ L + +L S+ IKI+LP+G + W T+P +A IS +LA A+ + VNG L+D+ RPLE DC L+ TFDS EG+ FWHSSAH+LG A EQQ G LC GP T GFY+D F G + + ++ + QPF R+E +RDQ ++F DN+FK+ +I + T TVY CG VDLCRGPH+ +T + L SSA WR E+LQRV GIS+P + ++ + Sbjct: 37 LAERFGLFEELWTAHVKKLASMTQKKARAIKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWHSSAHVLGAAAEQQLGAVLCRGPSTE--SGFYHDFFLGKERTVRSAELPILERICQELIAAAQPFRRLEASRDQLRQLFKDNHFKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIGALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNW 295
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTM_HUMAN (Threonyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.205e-50 Identity = 106/259 (40.93%), Postives = 150/259 (57.92%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDP---IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYG-DLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVK 908 + +R+ LF+ L + Q RL S+ IKI+LP G + W T+P +A+ IS +LA A+ + VNG +D+ RPLE D DL+ TFDS EG+ FWHSS H+LG A EQ G LC GP T GFY+D F G + + ++ + +PF R+E +RDQ ++F DN FK+ +I + T TVY CG LVDLC+GPH+ +T + G L SS+ WR + E+LQRV GIS+P + ++ Sbjct: 32 LAERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAVLCRGPSTE--YGFYHDFFLGKERTIRGSELPVLERICQELTAAARPFRRLEASRDQLRQLFKDNPFKLHLIEEKVTGPTATVYGCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPETLQRVSGISFPTTELLR 288
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CYTH3 (Threonyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=thrS PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.417e-50 Identity = 98/235 (41.70%), Postives = 154/235 (65.53%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKITLPDGS++E ++ TS M IA IS+ LA N L + VNG +WD +R + +D ++L T++ EG+ TFWHSSAH+L +A+E Y G K IGP G FYYD +GD + D F++I+ + + AK+K + R E+++ A+ F+D +K++++ L +D +IT Y+ G DLCRGPHIP+T F+K + + AYWRG++ + L R+YG+++P ++ +K+Y+ Sbjct: 2 IKITLPDGSIREYEKGITS-MGIALSISEGLARNVLAAKVNGEIWDASRAITSDSTVQLLTWNDTEGKSTFWHSSAHLLAEALEALYPGTKFGIGPAIETG--FYYDVDFGDRAFSQDDFENIEKKVLELAKQKNAYIRKEISKKDAVAYFTDKQDPYKLDLLEGL-SDGSITFYKQGAFTDLCRGPHIPDTGFIKAVKLMSVAGAYWRGDEKSKQLTRIYGVTFPKQQELKDYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_PARD8 (Threonyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=thrS PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.266e-49 Identity = 98/235 (41.70%), Postives = 149/235 (63.40%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKIT PD SV+E + T+ M IA+ IS LA L + VNG +WD++RP+ D +KL ++ +EG+ FWHSSAH++ +A+++ Y G K IGP G FYYD G+ + F +I+++ + +K+ +R ++T+ A++MF D +K E+I++L D TIT Y G DLCRGPH+PNTS++K L + AYWRG++ R+ L R+YGI++P KK + EY+ Sbjct: 2 IKITFPDNSVREYAKGTTA-MQIAESISSRLAQEVLAASVNGEVWDLSRPINDDATVKLLKWEDEEGKHAFWHSSAHLMAEALQELYPGIKFGIGPAIENG--FYYDVDPGEAVIKEGDFAAIEAKMLELVAKKEEIKRQDITKADAMKMFGDRGEEYKTELISELE-DGTITTYTQGSFTDLCRGPHLPNTSYLKAVKILSVAGAYWRGDEKRKQLVRLYGITFPKKKMLDEYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_PORG3 (Threonyl-tRNA synthetase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=thrS PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.599e-48 Identity = 102/237 (43.04%), Postives = 144/237 (60.76%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGD-LGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKIT PDG+ +E + T DIA IS L + L + VNG +WD+ RP+ D ++KLF +D EG+ FWHSSAH++ +A+E+ Y G K IGP G FYYD G+ + + +I+ A K+ R ++ + AL MF D + +KVE+I++L AD TIT Y G DLCRGPH+PNT ++K L + AYWRG++ R+ L R+YGIS+P KK + EY+E Sbjct: 2 IKITFPDGNFREYEAGITG-WDIAGSISPRLQQDVLAAGVNGQVWDLHRPINEDAEVKLFKWDDAEGKHAFWHSSAHLMAEALEELYPGIKFGIGPAIENG--FYYDVDPGEGISIKDADLPAIEKRMQDLAARKETIIRRDIAKADALRMFGDKDDQYKVELISEL-ADGTITTYTQGGFTDLCRGPHLPNTGYIKAIKLLSVAGAYWRGDEKRKQLTRIYGISFPKKKMLDEYLE 234 The following BLAST results are available for this feature:
BLAST of FC878164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878164 ID=FC878164; Name=FC878164; organism=Citrus clementina; type=EST; length=922bpback to top |