FC878164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_THELT (Threonyl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=thrS PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.391e-28 Identity = 74/239 (30.96%), Postives = 129/239 (53.97%), Query Frame = 3 Query: 219 PIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCK---LCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 PIK+ + + +G+ P+ I + I + ++ NG L D+ +++D +++ + + + H+ +HIL QA+ YG K L IGP G FYYD + + + I+ E K ++ P ERIE+++D A+ + D +KVE++ ++ D +T+++ G VDLCRGPH+P+T VK F L S AYW+G++ LQRVYG ++ ++ +K Y++ Sbjct: 2 PIKVKIKN----DGEFISEKPVQIREIIRSD---EVIAAVFNGKLIDLRSTIDSDGEVEFVDLFHELAPEVYRHTMSHILAQAVMNVYGKKNVRLGIGPAIENG--FYYDFEILNGKITEEDLSRIEEEMKKIIEQNIPVERIEMSKDDAISFMTEKDQPYKVELLKEIQ-DNKVTLFKQGDFVDLCRGPHMPSTGMVKHFKLLSVSGAYWKGDEKNPMLQRVYGTAFLRQEELKNYLD 230
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_TREDE (Threonyl-tRNA synthetase OS=Treponema denticola GN=thrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28 Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 429 TFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFV--KGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 T HS+AH++ +A+ + G K+ IGP G FYYD F +N D +I+ E K + FE+ ++R++ALEMF D FK+E+I LPAD+ I++Y+ G DLCRGPH+ + + + +GF +K + AYWRG++ R L R+YG ++ +KEY+ Sbjct: 13 TLRHSTAHVMAEAVVNLFPGTKVAIGPAIDYG--FYYD-FELPRPINNDDLPAIEKEMRKILTTRSNFEKEVISREKALEMFKDQPFKIELIKGLPADEEISIYKSGEFTDLCRGPHVCSMADINAQGFKLMKIAGAYWRGDETRPMLTRIYGTAWEKPNDLKEYL 175
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_SULSY (Threonyl-tRNA synthetase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=thrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28 Identity = 67/199 (33.67%), Postives = 112/199 (56.28%), Query Frame = 3 Query: 339 VNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCK---LCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 +NG + D+ P+ +LK + E + HS AHI+ QA+++ YG + L IGP T G FYYD L + I+ + + K+ ER E+ R++A++ F + +K++II +++P + I++Y+ G VDLCRGPH+P+T F + S AYWRG + LQR+YG+++ +K +K+Y+ Sbjct: 40 LNGEIIDIHTPINQSGNLKFLKKEDKESLEILRHSLAHIMAQALKEIYGDENVHLGIGPTTEHG--FYYDVEIEGKSLTDEDLPQIEEKMKEIIKKGYQIERFELPREEAIKFFENKKEIYKIDIIKHNIPEGEPISLYKQGDFVDLCRGPHLPSTDKAGAFKLISVSGAYWRGKETNPMLQRIYGVAFWSEKELKDYL 236
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_ERWT9 (Threonyl-tRNA synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=thrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28 Identity = 80/234 (34.19%), Postives = 119/234 (50.85%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIIND-LPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 ITLPDGS + S MDIA I LA + VNG L D P+ D + + T + G + HS AH+LG AI+Q + K+ IGP G FYYD D L + + ++ + A+ + +V+ +A + F+ N+K I+++ + D +Y VD+CRGPH+PN F F K S AYWRG+ + + LQR+YG ++ DKK + Y+ Sbjct: 4 ITLPDGSQRSFDH-AVSVMDIAMDIGPGLAKACIAGRVNGELVDAVDPIVDDASVAIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNG--FYYDVDL-DRTLTQEDIELLEKRMHQLAETNYDVIKKKVSWQEARDAFAARGENYKTTILDENISHDDRPGLYHHQEYVDMCRGPHVPNMRFCHHFKLQKISGAYWRGDSNNKMLQRIYGTAWADKKQLAAYL 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_COLP3 (Threonyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=thrS PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28 Identity = 78/234 (33.33%), Postives = 121/234 (51.71%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIIND-LPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 ITLPDGS + ++ S MD+A I LA + ++G L D + D L+L T EG + HS AH+LG AI+Q Y K+ IGP T GFYYD D ++ D ++ + A+ + + A + F++ +K+ I+++ + T +Y +D+CRGPH+P+ F +K + AYWRG+ D + LQR+YG ++ DKK +K YI Sbjct: 4 ITLPDGSQRSFEQ-AVSVMDVALDIGPGLAKATIAGRIDGNLVDACELITQDASLQLITSKDSEGLEIIRHSCAHLLGHAIKQLYPNVKMAIGP--TIENGFYYDIDL-DESISEDDLVKLEKRMTELARTGYEVVKKTGSWQDAYDAFTERGETYKLAILDENIEKTDTPALYHHQEYIDMCRGPHVPSMRHCHHFKLMKVAGAYWRGDSDNKMLQRIYGTAWADKKQLKAYI 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_PECCP (Threonyl-tRNA synthetase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=thrS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.373e-28 Identity = 77/235 (32.77%), Postives = 120/235 (51.06%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIIND-LPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 ITLPDGS + SP+D+A I LA + VNG L D + ++ D L + T + G + HS AH+LG AI+Q + K+ IGP G FYYD D L + + ++ + A + +V+ +A + F+ +K+ I+++ + D +Y +D+CRGPH+PN F F K S AYWRG+ + LQR+YG ++ DKK + Y++ Sbjct: 4 ITLPDGSQRHYDH-AVSPLDVALDIGPGLAKACIAGRVNGELVDASDKIDTDAQLAIITAKDEAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNG--FYYDVDI-DRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKMAILDENISRDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQ 234
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_ERWCT (Threonyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=thrS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.373e-28 Identity = 77/235 (32.77%), Postives = 120/235 (51.06%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIIND-LPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 ITLPDGS + SP+D+A I LA + V+G L D + ++ D L + T D G + HS AH+LG AI+Q + K+ IGP G FYYD D L + + ++ + A + +V+ +A + F+ +K+ I+++ + D +Y +D+CRGPH+PN F F K S AYWRG+ + LQR+YG ++ DKK + Y++ Sbjct: 4 ITLPDGSQRHYDH-AVSPLDVALDIGPGLAKACIAGRVDGELIDASDKIDTDAQLAIITAKDDAGLEIIRHSCAHLLGHAIKQLWPDTKMAIGPVIDNG--FYYDVDI-DRTLTQEDIELLEKRMHELADTDYDVIKKKVSWQEARDAFAARGETYKIAILDENISHDDRPGLYHHEEYIDMCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWADKKQLASYLQ 234
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_DEIDV (Threonyl-tRNA synthetase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=thrS PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.373e-28 Identity = 84/238 (35.29%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSD-EGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEG-FYYDAFYGDLGLNPDHFKSID-SEADKAAKE----KQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKG-FGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 + LPDG E T+ +D A I LA +AL + NG L D+ PL + L T + + F HS H++ QA+ + Y K RG G + +Y D L P+ + D E +K +E F R EV++ + L F + +K E+I LP D+ IT Y+ G VDLCRGPH P+T + G F + S AYWRGN+ LQRVYG+++ +K + EY+ Sbjct: 3 VVLPDGKQLELPMGATA-LDAASAIGPRLAQDALAATANGELVDLMTPLPDGASITLITKKNPGDAAPLFRHSLGHVMSQAVGEYYRAKGYSDDRIKRGVGPSIENGWYQDFDL-PEPLREEDLPEIEKIMREILSRNLAFRRREVSKAEGLAQFPHDPYKQELIQGLPDDEPITFYQQGDYVDLCRGPHFPSTGRLPGAFKLMSTSGAYWRGNEKNPILQRVYGVAFASQKELDEYL 238
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_SILPO (Threonyl-tRNA synthetase OS=Silicibacter pomeroyi GN=thrS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.099e-28 Identity = 76/238 (31.93%), Postives = 126/238 (52.94%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTF-DSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKG--FGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 I +T PDG+ + T P +A IS SLA A+ + V+G WD+ P+ D + + T D + + H AHI+ +A+++ + K+ IGP G +YYD F P+ I+ + + +++P R +A+E + NN +KVE+I +P + I +Y G DLCRGPH+ +T V G F + + AYWRG+ +R LQR+YG+++ K+ +K ++ Sbjct: 4 ISLTFPDGNARSYDAGVT-PAQVAADISTSLAKKAISATVDGKHWDLQWPIATDAQIAIHTMADEAQANELVRHDLAHIMARAVQEIWPATKVTIGPVIENG--WYYD-FDRAEPFTPEDLGLIEKKMKEIINKREPVTTEVWERTRAIEFYKANNEPYKVELIEAIPGTEPIRMYWHGHWQDLCRGPHLQHTGQVPGDAFKLMSIAGAYWRGDSNRPMLQRIYGVAFTGKEKLKAHL 237
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_RHIME (Threonyl-tRNA synthetase OS=Rhizobium meliloti GN=thrS PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.099e-28 Identity = 72/236 (30.51%), Postives = 132/236 (55.93%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFV-KGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 + +T PDGSV+E T D+A+ ISKSLA A+ ++G L D++ + + +++ T + + H +AH++ +A+++ + G ++ IGP G FYYD F + PD I+ + + +PF + +RD+A E+F+ N+KVE+++ +P + + +Y G DLCRGPH+ +T + F +K + AYWRG+ + L R+YG ++ ++ + +Y+ Sbjct: 6 VSLTFPDGSVREFAAGTTG-RDVAESISKSLAKKAVAIAISGELRDLSDAV-TEGRIEIVTREDKRALELIRHDAAHVMAEAVQELWPGTQVTIGPVIDNG--FYYD-FAKNEPFTPDDLPVIEKKMREIIARNKPFTKEVWSRDRAKEVFAAKGENYKVELVDAIPEGQDLKIYYQGDWFDLCRGPHMASTGQIGTAFKLMKVAGAYWRGDSNNPMLTRIYGTAWHTQEELDQYL 236 The following BLAST results are available for this feature:
BLAST of FC878164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878164 ID=FC878164; Name=FC878164; organism=Citrus clementina; type=EST; length=922bpback to top |