FC878164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STAES (Threonyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=thrS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.400e-42 Identity = 92/234 (39.32%), Postives = 140/234 (59.83%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 I I PDG+ KE + T+ DIAQ IS L A+ NG L D+TRPLE D +++ T S+E + HS+AH++ QA+++ YG K +GP G FYYD F D ++ D F I+ + E R V++++A + F D+ +K+E+I+ +P D+++T+Y G DLCRG H+P+TS +K F L + AYWRGN D + LQR+YG ++ DKK +K +++ Sbjct: 4 INIQFPDGNTKEFDKGTTTE-DIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEIITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGG--FYYD-FDMDDKVSSDDFDKIEKTMKQIVNENHKIVREVVSKEKAKDFFKDDPYKLELIDAIPEDESVTLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLK 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STAEQ (Threonyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=thrS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.400e-42 Identity = 92/234 (39.32%), Postives = 140/234 (59.83%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 I I PDG+ KE + T+ DIAQ IS L A+ NG L D+TRPLE D +++ T S+E + HS+AH++ QA+++ YG K +GP G FYYD F D ++ D F I+ + E R V++++A + F D+ +K+E+I+ +P D+++T+Y G DLCRG H+P+TS +K F L + AYWRGN D + LQR+YG ++ DKK +K +++ Sbjct: 4 INIQFPDGNTKEFDKGTTTE-DIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEIITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGG--FYYD-FDMDDKVSSDDFDKIEKTMKQIVNENHKIVREVVSKEKAKDFFKDDPYKLELIDAIPEDESVTLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLK 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STAAN (Threonyl-tRNA synthetase OS=Staphylococcus aureus (strain N315) GN=thrS PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.400e-42 Identity = 91/236 (38.56%), Postives = 141/236 (59.75%), Query Frame = 3 Query: 216 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 + I I PDG+ K + T+ DIAQ IS L A+ NG L D+T+PLE D + + T S+E + HS+AH++ AI++ YG K +GP G FYYD F D ++ D F+ I+ + E ER V+RD+A E+FS++ +K+E+I+ +P D+ +T+Y G DLCRG H+P+T+ +K F L + AYWRG+ + + LQR+YG ++ DKK +K +++ Sbjct: 2 EQINIQFPDGNKKAFDKGTTTE-DIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIGIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGG--FYYD-FDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STAAM (Threonyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=thrS PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.400e-42 Identity = 91/236 (38.56%), Postives = 141/236 (59.75%), Query Frame = 3 Query: 216 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 + I I PDG+ K + T+ DIAQ IS L A+ NG L D+T+PLE D + + T S+E + HS+AH++ AI++ YG K +GP G FYYD F D ++ D F+ I+ + E ER V+RD+A E+FS++ +K+E+I+ +P D+ +T+Y G DLCRG H+P+T+ +K F L + AYWRG+ + + LQR+YG ++ DKK +K +++ Sbjct: 2 EQINIQFPDGNKKAFDKGTTTE-DIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIGIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGG--FYYD-FDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STAA1 (Threonyl-tRNA synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=thrS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.400e-42 Identity = 91/236 (38.56%), Postives = 141/236 (59.75%), Query Frame = 3 Query: 216 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 + I I PDG+ K + T+ DIAQ IS L A+ NG L D+T+PLE D + + T S+E + HS+AH++ AI++ YG K +GP G FYYD F D ++ D F+ I+ + E ER V+RD+A E+FS++ +K+E+I+ +P D+ +T+Y G DLCRG H+P+T+ +K F L + AYWRG+ + + LQR+YG ++ DKK +K +++ Sbjct: 2 EQINIQFPDGNKKAFDKGTTTE-DIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIGIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGG--FYYD-FDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_BACHD (Threonyl-tRNA synthetase OS=Bacillus halodurans GN=thrS PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.400e-42 Identity = 94/239 (39.33%), Postives = 140/239 (58.58%), Query Frame = 3 Query: 216 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY---GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 D I IT PDG+VKE + T+ +IA IS L AL M++G L D+ P+E D + + T +SDE + HS+AH++ QA+++ + KL +GP G FYYD D L P+ I+ E K E P ER+ V+R++AL + + + +K+E+INDLP D+TIT+Y G DLCRG H+P+T +K F L + AYWRG+ + LQR+YG ++ K + E++ Sbjct: 3 DMINITFPDGAVKEFPKGTTTA-EIAGSISPGLKKKALAGMLDGTLLDLNTPIEQDGTITIVTPESDEALEVLRHSTAHVMAQALKRLFKDRNVKLGVGPVIEGG--FYYDVDM-DESLTPEDLPKIEKEMKKIIGENLPIERVVVSREEALARYEEVGDPYKIELINDLPEDETITIYEQGEFFDLCRGVHVPSTGKLKEFKLLNLAGAYWRGDSSNKMLQRIYGTAFFKKADLDEHL 237
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STAA8 (Threonyl-tRNA synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=thrS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.097e-41 Identity = 90/236 (38.14%), Postives = 141/236 (59.75%), Query Frame = 3 Query: 216 DPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 + I I PDG+ K + T+ DIAQ IS L A+ NG L D+T+PLE D +++ T S+E + HS+AH++ AI++ YG K +GP G FYYD F D ++ D F+ I+ + E ER V+RD+ E+FS++ +K+E+I+ +P D+ +T+Y G DLCRG H+P+T+ +K F L + AYWRG+ + + LQR+YG ++ DKK +K +++ Sbjct: 2 EQINIQFPDGNKKAFDKGTTTE-DIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGG--FYYD-FDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEVKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOBA (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=thrS PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.097e-41 Identity = 90/234 (38.46%), Postives = 138/234 (58.97%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IK++L DGSVKE + S +IA+ IS+ LA NA +VNG + D+ + D L + TFDS EG+D HS +H+L A+++ + KL IGP G FYYD F D+ + + +++E K KE E+ E+ RD+ALE+ D +KVE+INDL D+ I+ Y+ G DLC GPH+ + +K +++ AYW+G++ + L R+YG ++ K + EY+E Sbjct: 2 IKVSLKDGSVKEFEAG-LSVYEIAKSISEGLARNACCGVVNGKVCDLRNKINEDVSLSICTFDSQEGKDAVRHSISHVLAYAVKRLFPQTKLAIGPSIATG--FYYD-FDKDVAFSAQDLEKLEAEMKKIIKENPSIEKFELPRDEALELMKDEPYKVELINDLGEDEIISFYKIGEFTDLCAGPHVMSLKPIKALKLTRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLE 231
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOPS (Threonyl-tRNA synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=thrS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.433e-41 Identity = 92/234 (39.32%), Postives = 139/234 (59.40%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGC-KLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKITL DGS+KE + S +IAQ IS+ LA NA ++NG + D+ + D L++ TFDS EG+ F H+++H+L A+++ + KL IGP G FYYD F + + D ++ E K KE +R E+ R++ALE+ D +KVE+INDLP + I+ Y+ G VDLC GPH+ +K L+++ AYW+G++ + L RVYG ++P K + Y+E Sbjct: 2 IKITLKDGSIKEVEAG-LSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICTFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNG--FYYD-FDTEKSFSADQLNKLEEEMKKIIKENPEIKRFELPRNEALELMKDEPYKVELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLE 231
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOBB (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=thrS PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.433e-41 Identity = 89/234 (38.03%), Postives = 140/234 (59.83%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IK+TL DGSVKE + S +IA+ IS+ LA NA +VNG + D+ ++ D L + TFDS EG+D HS +H+L A+++ + KL IGP G FYYD F D+ + + +++E K KE E+ E+ R++ALE+ D +KVE+INDL D+ I+ Y+ G DLC GPH+ + +K ++++ AYW+G++ + L R+YG ++ K + EY++ Sbjct: 2 IKVTLKDGSVKEFEAG-LSVYEIAKSISEGLARNACCGVVNGKVCDLREEVKEDVSLSICTFDSQEGKDAVRHSISHVLAYAVKRLFPETKLAIGPSIATG--FYYD-FDKDVAFSAQDLEKLEAEMKKIIKENPSIEKFELPRNEALELMKDEPYKVELINDLGEDEIISFYKLGEFTDLCAGPHVMSLKPIKAIKLIRSAGAYWKGDEKNKMLTRIYGTAFLKKSELDEYLD 231 The following BLAST results are available for this feature:
BLAST of FC878164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878164 ID=FC878164; Name=FC878164; organism=Citrus clementina; type=EST; length=922bpback to top |