FC878164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_NATTJ (Threonyl-tRNA synthetase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=thrS PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.871e-41 Identity = 95/238 (39.92%), Postives = 148/238 (62.18%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVK--GFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 +KITL DGSVKE ++ ++ +D+A+ IS LA A+ + V+G + + L +C++++ +F+ DEG D + H+S+HIL A+++ Y KL IGP +GFYYD F + L+ + I E K KE P ER RD+A+EMF + ++K+E+I DL D+ I Y+ G +DLC+GPH+P+T +K LK + AYWRG+++R LQR+YG S+ K ++EYI+ Sbjct: 2 LKITLKDGSVKEIEKG-SNVLDLAKSISNRLAKEAVGAKVDGKTVGLNKELNENCEVEILSFEDDEGCDIYRHTSSHILAHAVKRLYDNVKLGIGPPIK--DGFYYD-FDLEHSLSDKDLEDIKKEMKKIIKEDLPIERKVYKRDEAIEMFKEMGEDYKIELIQDLGEDEEICCYQQGDFIDLCQGPHLPSTGKIKDTALDLLKVAGAYWRGDENRAMLQRIYGTSFIKKSQLEEYIQ 235
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STRSY (Threonyl-tRNA synthetase OS=Streptococcus suis (strain 05ZYH33) GN=thrS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 95/235 (40.43%), Postives = 141/235 (60.00%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKT-ITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKIT PDG+V+E + T+ +IA+ ISKSLA AL NG L D TR ++ D L++ D D+ D HS+AH+ QA + + KL +GP +GFYYD ++ + I E K KE P ER EVT+++ALE+F ++ +K+E+I++ D+ +T+Y G VDLCRGPH+P+T ++ F L + AYWRG + +QRVYG ++ DKK +K Y++ Sbjct: 2 IKITFPDGAVREYQAGVTT-FEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIVMPDHDDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQ--DGFYYDTDNAAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIHEHSDDEGGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STRS2 (Threonyl-tRNA synthetase OS=Streptococcus suis (strain 98HAH33) GN=thrS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 95/235 (40.43%), Postives = 141/235 (60.00%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKT-ITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKIT PDG+V+E + T+ +IA+ ISKSLA AL NG L D TR ++ D L++ D D+ D HS+AH+ QA + + KL +GP +GFYYD ++ + I E K KE P ER EVT+++ALE+F ++ +K+E+I++ D+ +T+Y G VDLCRGPH+P+T ++ F L + AYWRG + +QRVYG ++ DKK +K Y++ Sbjct: 2 IKITFPDGAVREYQAGVTT-FEIAESISKSLAKKALAGKFNGKLIDTTRAIDEDGTLEIVMPDHDDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQ--DGFYYDTDNAAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIHEHSDDEGGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRGKSENPMMQRVYGTAWFDKKDLKAYLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_MARMM (Threonyl-tRNA synthetase OS=Maricaulis maris (strain MCS10) GN=thrS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 94/236 (39.83%), Postives = 138/236 (58.47%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFV-KGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 I +TLPDGS +E SP+D+A ISKSLA A+I+ V+G WD+ RPL+ D + + T D+ + H +AHIL QA++ + G ++ IGP +GFYYD F P+ F++I+ + PFER R+ A+ F + +K E+I DLP D+TIT+YR G DLC GPH+P+T + K F +K + AYWRG+ LQR+YG ++ D K +K ++ Sbjct: 2 INVTLPDGSKRELPDG-ASPLDLAADISKSLAKAAIIATVDGQDWDLKRPLDGDAQVAIITRKDDKALEVIRHDTAHILAQAVQDLFPGTQVTIGPAIE--DGFYYD-FARSEPFTPEDFEAIEKRMGEIVDADLPFEREVWDRNDAIAKFEEMGEAYKAELIRDLPEDETITIYRQGEWFDLCLGPHLPSTGKIGKAFKLMKVAGAYWRGDHRNAMLQRIYGTAWADDKQLKAHL 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOPE (Threonyl-tRNA synthetase OS=Clostridium perfringens GN=thrS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 92/234 (39.32%), Postives = 139/234 (59.40%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGC-KLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKITL DGS+KE + S +IAQ IS+ LA NA ++NG + D+ + D L++ TFDS EG+ F H+++H+L A+++ + KL IGP G FYYD F + + D ++ E K KE +R E+ R++ALE+ D +KVE+INDLP + I+ Y+ G VDLC GPH+ +K L+++ AYW+G++ + L RVYG ++P K + Y+E Sbjct: 2 IKITLKDGSIKEVEAG-LSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICTFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNG--FYYD-FDTEKPFSADQLNKLEEEMKKIIKENPEIKRFELPRNEALELMKDEPYKVELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLE 231
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOP1 (Threonyl-tRNA synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=thrS PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41 Identity = 92/234 (39.32%), Postives = 139/234 (59.40%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGC-KLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKITL DGS+KE + S +IAQ IS+ LA NA ++NG + D+ + D L++ TFDS EG+ F H+++H+L A+++ + KL IGP G FYYD F + + D ++ E K KE +R E+ R++ALE+ D +KVE+INDLP + I+ Y+ G VDLC GPH+ +K L+++ AYW+G++ + L RVYG ++P K + Y+E Sbjct: 2 IKITLKDGSIKEVEAG-LSIFEIAQSISQGLARNACCGILNGKVEDLRFIVNEDSSLEICTFDSKEGQHAFNHTASHVLAAAVKRLFPQDKLAIGPSIDNG--FYYD-FDTEKPFSADQLNKLEEEMKKIIKENPEIKRFELPRNEALELMKDEPYKVELINDLPEGEVISFYQIGDFVDLCAGPHLMAVKPIKAVKLLRSTGAYWKGDEKNKMLSRVYGTAFPKKSELDAYLE 231
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_BACFR (Threonyl-tRNA synthetase OS=Bacteroides fragilis GN=thrS PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.192e-41 Identity = 88/235 (37.45%), Postives = 140/235 (59.57%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKIT PDGSV+E + + IA+ IS LA + L VNG ++D+ RP+ D + L+ ++ ++G+ FWH+SAH+L +A+++ Y G + IGP G FYYD G+ + +I+++ + +K+ R ++ + AL+MF D +K E+I++L D IT Y G DLCRGPH+ T+ +K + AYWRG++DR+ L R+YGI++P KK + EY+ Sbjct: 2 IKITFPDGSVREYNEG-VNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLYKWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENG--FYYDVDPGEAVIKEADLPAIEAKMAELVAKKEAVVRRDIAKGDALKMFGDRGETYKCELISELE-DGHITTYTQGDFTDLCRGPHLMTTAPIKAIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_BACFN (Threonyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=thrS PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.192e-41 Identity = 88/235 (37.45%), Postives = 140/235 (59.57%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKIT PDGSV+E + + IA+ IS LA + L VNG ++D+ RP+ D + L+ ++ ++G+ FWH+SAH+L +A+++ Y G + IGP G FYYD G+ + +I+++ + +K+ R ++ + AL+MF D +K E+I++L D IT Y G DLCRGPH+ T+ +K + AYWRG++DR+ L R+YGI++P KK + EY+ Sbjct: 2 IKITFPDGSVREYNEG-VNGLQIAESISSRLAQDVLACGVNGEIYDLGRPINEDASVVLYKWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENG--FYYDVDPGEAVIKEADLPAIEAKMAELVAKKEAVVRRDIAKGDALKMFGDRGETYKCELISELE-DGHITTYTQGDFTDLCRGPHLMTTAPIKAIKLTSVAGAYWRGHEDRKMLTRIYGITFPKKKMLDEYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOBK (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=thrS PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.169e-41 Identity = 93/235 (39.57%), Postives = 134/235 (57.02%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKITL DG V E + DIA IS +L AL + ++G D+ L D L++ TF+ + G+ H+ AHIL QA+++ Y KL IGP G FYYD F D P+ + I++E K KE ER E+ R++A+ + +NN +KVE+I DLP + I+ Y+ G DLC GPH+P+T VK L + AYWRGN++ + LQR+YG ++ K + EY+ Sbjct: 2 IKITLKDGKVMEFEEG-IKISDIAMKISPALYKKALAAKIDGETMDLMTELHKDSSLEILTFEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGPAIDTG--FYYD-FEADFTFTPEILEKIEAEIKKIIKENHKLERFELPREEAINLMKENNEDYKVELIEDLPEGEVISFYKQGDFTDLCAGPHVPSTGKVKSVKLLSLAGAYWRGNENNKMLQRIYGTAFTKKSELDEYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_THETN (Threonyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=thrS PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41 Identity = 87/233 (37.34%), Postives = 142/233 (60.94%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 ITL DG+ +E ++ T +IA+ IS LA A+ NG + ++ +E D +L++ TF+ +EG+ +WH+S+HIL QA+++ + KL IGP G FYYD F + + F++I+ E +K KE ER +++++A++ D +KVE+I ++P + I+ Y+ G VDLC GPH+P+T VK L + AYW+G++ + LQR+YGIS+P K + EY+ Sbjct: 13 ITLRDGTKREFEKGITV-YEIAKSISDKLAREAVGGKFNGKIVELNTKIEEDGELEILTFEDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAIDNG--FYYD-FDTERPFTTEDFEAIEEEMNKIIKEDYKLERFVLSKEEAIKFMKEKDEPYKVELIEEIPEGEEISFYKQGEFVDLCAGPHLPSTGMVKAIKLLSVAGAYWKGDEKNKMLQRIYGISFPKKSMLDEYL 241 The following BLAST results are available for this feature:
BLAST of FC878164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878164 ID=FC878164; Name=FC878164; organism=Citrus clementina; type=EST; length=922bpback to top |