FC878172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_SYNFM (Probable potassium transport system protein kup 1 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=kup1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 74/247 (29.96%), Postives = 129/247 (52.23%), Query Frame = 1 Query: 238 RWENLVLAYKTLGVVFGGLVTSPLYV----YPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 R L LA LG+V+G + TSPLY + +P + +G+ S++ W+LT++ +KY + ++AD++GEGG FAL +L+ GK + AR +++ A+ G +L GDG +TP+I+VLSA++G+ +K+L+ L+ +L+ LFL+Q GT+++ +F P+M W + +G+ I+ + P + A+SP Y + FF G ++L Sbjct: 42 RGRMLSLALGALGIVYGDIGTSPLYTIKECFHGTHAIAPNPANIMGVLSLILWSLTMVVSIKYITFMMRADNRGEGGIFALLALVPMS---------------------------GKLISRG--ARAVVVMAALTGAALLYGDGFITPSITVLSAIEGLEVA-TDAAKNLIVPLACGILLGLFLVQSRGTAKIGRIFGPVMLVWFATIATLGLLCIVRN-PVVLDAVSPVYAYRFFAEHHVHGLVVL 257
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_GEOLS (Probable potassium transport system protein kup OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=kup PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.179e-27 Identity = 77/245 (31.43%), Postives = 125/245 (51.02%), Query Frame = 1 Query: 241 WENLVLAYKTLGVVFGGLVTSPLYVYPSM-PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDG--IRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 W +V K +G+VFG + TSP+Y + L PT + GI S++FWT+T++ +YA +A++ +GEGG L +L+R + G ++F+ LG+ +L+GDG++TPAIS+LSA++G + + +S + ++AI+ + LF+ Q GT +V+ F PIM W S L G S+ H P + A+SPHY F G G+++L Sbjct: 10 WGGIV---KAMGLVFGDIGTSPIYTLTVVFALTEPTMQNVFGILSLVFWTMTILVTAEYAWLAMRLGRKGEGGAIVLKEILARMIRPG-------------------------------RQLTFVVFLTYLGVSLLMGDGVITPAISILSAVEGMVLIPGLGGLHQSWLILIAAIIAVGLFVFQFKGTDKVAGAFGPIMVVWFASLALSGAVSVASH-PTVLFAVSPHYALQFLLDNGLAGFIVL 219
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_RALEH (Probable potassium transport system protein kup 1 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=kup1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.179e-27 Identity = 74/241 (30.71%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKSP----TEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 L +GVVFG + TSPLY K + + LG+ S++FW + ++ +KY ++AD+ GEGG AL +L+ R + R G+ R+L+ + + G CM GD ++TPAISVLSA++G+ P +S+ ++ ++ ++L LFL+Q+ GT+ + LF PIM AW + +GI ++ P I KA++P+Y F + +++L Sbjct: 19 LVLGAVGVVFGDIGTSPLYALKECFSKEHGIMFSPEAVLGVISMLFWAMIIVVSIKYVVFVMRADNDGEGGVLALMALVLRTV----------------------APRSGR--------ARVLMMLGIFGACMFYGDAVITPAISVLSAVEGLEIAAPQLSQFVI-PITLMILAALFLIQRHGTATMGKLFGPIMTAWFLALGGLGILHLV-QAPEILKAINPYYAITFLVEHALQAFIVL 227
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_XANC5 (Probable potassium transport system protein kup OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=kup PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.845e-27 Identity = 79/231 (34.20%), Postives = 118/231 (51.08%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFF 933 L +GVVFG + TSPLY P L +P D LGI S++FW L L+ +KY ++ ++AD+ GEGG AL +L R + G S S++ G + + G + GDG++TPAISVLSA++G+ P + + V ++ +VL +LFL Q+FGT RV F PI W F+ +G+Y++ P + AL+P + FF Sbjct: 21 LVIGAIGVVFGDIGTSPLYTLKEAFSPHYGL-TPDHDTVLGILSLVFWALMLVVTLKYVTVIMRADNDGEGGIMALTALAQRTLPGG--------SRSMYVVG----------------------ILGIFGASLFFGDGVITPAISVLSAVEGLEVAAPRL-EPFVVPITLVVLGMLFLAQRFGTERVGKAFGPITLLWFFALGAIGVYNMA-RAPEVLHALNPWWGVRFF 218
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP2_GEOMG (Probable potassium transport system protein kup 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=kup2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.845e-27 Identity = 77/237 (32.49%), Postives = 126/237 (53.16%), Query Frame = 1 Query: 265 KTLGVVFGGLVTSPLYVYPS-MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIR--APFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 K++G+VFG + TSP+Y M L P + LGI S++ WTL ++ V+YA +A+ +GEGGT L +L R + G A + F+A +G+ +L+GDGI+TPAIS+LSA++G+R + ++++ ++ ++A++ ++LF+ Q GT +V+ F PIM W + L GI SI P + A+SPH+ F G G+ +L Sbjct: 15 KSMGLVFGDIGTSPIYTLTVIMTLTKPDAEHVLGILSLIVWTLIILVSVEYAWLAMSLGRKGEGGTIVLKEILVRLLKSGRQVA-------------------------------FVGFLAFMGVSLLLGDGIITPAISILSAVEGMRLIPGWENLAQGVLIFIAAVIALILFIFQFKGTDKVAGAFGPIMVIWFGALTLSGIVSIA-GTPEVVSAVSPHHAVTFLMHNGLAGFFIL 219
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_RALSO (Probable potassium transport system protein kup 1 OS=Ralstonia solanacearum GN=kup1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.845e-27 Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 1 Query: 271 LGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLL 963 +GVVFG + TSPLY P + T+ Y G+ S++FW++TL+ +KY ++AD+ GEGG AL +L R G A+ + R L+ + +LG M GD ++TPAISVLSA++G+ P++ + V LS IVL+ LFLLQK GT V LF P+M W L+G++S++ P I AL+P + F +R + +++ Sbjct: 5 IGVVFGDIGTSPLYALKECFNPEHGVPFSTQTVY-GVLSMLFWSMTLVVSIKYVVFVMRADNNGEGGILALTALAMRASSGG---ARTI---------------------------RTLMLLGLLGASMFYGDAVITPAISVLSAVEGMEVMTPAL-QPWVLPLSLIVLVGLFLLQKHGTHVVGRLFGPVMLFWFVLLGLIGLFSVLRS-PQILVALNPVHAIEFMFRHAVQAFIV 207
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_LEGPH (Probable potassium transport system protein kup 1 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=kup1 PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.845e-27 Identity = 78/241 (32.37%), Postives = 126/241 (52.28%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKSPTED-DYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSL---VEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 LA LGVVFG + TSPLY P + LG+ S++FW+L +I KY I +AD+ GEGG AL +L+ K S + + +A+ G +L+GDG+LTPAISV+SA++G+ ++S L V +++++L++LF LQ GT+R+ +LF P++ W + ++GI I+ H P + +A++P++ F +G G+ LL Sbjct: 10 LALGALGVVFGDIGTSPLYALKVTLSGIPINQFNILGVLSLIFWSLIIIVSFKYLMIIFRADNDGEGGILALLALMKHK---------------------------------STKYQPLFYIVAIFGAGLLLGDGMLTPAISVVSAVEGLG----TLSDKLYPYVLPIASVILVLLFSLQAKGTARIGYLFGPLILIWFITIAILGILQIVEH-PVVLQAINPYHAIAFLVDEGLRGYFLL 212
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_XANAC (Probable potassium transport system protein kup OS=Xanthomonas axonopodis pv. citri GN=kup PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.716e-27 Identity = 79/231 (34.20%), Postives = 117/231 (50.65%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFF 933 L +GVVFG + TSPLY P L +P D LGI S++FW L L+ +KY + ++AD+ GEGG AL +L R + G S S++ G + + G + GDG++TPAISVLSA++G+ P + + V ++ +VL +LFL Q+FGT RV F PI W F+ +G+Y++ P + AL+P + FF Sbjct: 21 LVIGAIGVVFGDIGTSPLYTLKEAFSPHYGL-TPDHDTVLGILSLVFWALMLVVTLKYVTAIMRADNDGEGGIMALTALAQRTLPGG--------SRSMYVVG----------------------ILGIFGASLFFGDGVITPAISVLSAVEGLEVAAPKL-EPFVVPITLVVLSMLFLAQRFGTERVGKAFGPITLLWFFALGAIGVYNMA-RAPEVLHALNPWWGVRFF 218
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_THIDA (Probable potassium transport system protein kup OS=Thiobacillus denitrificans (strain ATCC 25259) GN=kup PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.716e-27 Identity = 81/240 (33.75%), Postives = 125/240 (52.08%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSM---PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 LA LGVVFG + TSPLY + + T+D+ LGI S++FW L L+ +KY + ++AD++GEGG AL SL+ + + +SR AR I++ + LG + GD ++TPAISVLSA++G+ P++ ++ L+ +L+ LF +Q+ GT+ + LF PIM W ++G I H P + AL P + FF G G+L+L Sbjct: 13 LALGALGVVFGDIGTSPLYTMKEVFGGHHLALTQDNVLGILSLIFWALILVVSLKYVLVIMRADNKGEGGILALLSLVQGQAPL--------------------RSR----------ARWIIMSLGFLGASLFFGDSLITPAISVLSAVEGLEIGAPALHPFIL-PLALGILVGLFAIQRRGTASIGRLFGPIMLLWFAVLGVLGAIGIAKH-PQVLAALLPIHAIQFFMTHGTAGFLIL 220
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_PELPD (Probable potassium transport system protein kup OS=Pelobacter propionicus (strain DSM 2379) GN=kup PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.716e-27 Identity = 75/237 (31.65%), Postives = 122/237 (51.48%), Query Frame = 1 Query: 265 KTLGVVFGGLVTSPLYVYPSM-PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDG--IRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 K++G+VFG + TSP+Y + L PT+D+ LGI S++ WTL ++ ++YA +A+ +GEGG L +L R + G A + F+ LG+ +L+GDG++TPAIS+LSA++G + +S++ + ++ + + LF+ Q GT +V+ F PIM W + L G S+ H PGI A+SPH+ F G G+ +L Sbjct: 15 KSMGLVFGDIGTSPIYTLTVIIALTKPTQDNILGIISLIVWTLIILVHLEYAVLAMSLSRKGEGGEIVLREILVRMIKPGRQMA-------------------------------FVTFLTYLGVALLMGDGVITPAISILSAVEGTLLIPGLGGLSQNTLILIAGTIALFLFVFQYKGTDKVARAFGPIMVLWFAALALSGAISVSSH-PGILAAISPHHAISFLMHNGLPGFFVL 219 The following BLAST results are available for this feature:
BLAST of FC878172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 336
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878172 ID=FC878172; Name=FC878172; organism=Citrus clementina; type=EST; length=966bpback to top |